Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0075
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   1.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   5.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 337 QVV*RYANHLTIPLTTIHFRWRH 269
           +V+    NHL+   TTIH+   H
Sbjct: 117 EVIIDVVNHLSSDSTTIHWHGHH 139


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 155 GPGYCLSFFDFLLFRWVDKLTNYLV 229
           GP      F++ +  W+ K T +++
Sbjct: 771 GPMVWYQMFEYAIGHWLQKATEHVI 795


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 155 GPGYCLSFFDFLLFRWVDKLTNYLV 229
           GP      F++ +  W+ K T +++
Sbjct: 771 GPMVWYQMFEYAIGHWLQKATEHVI 795


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 155 GPGYCLSFFDFLLFRWVDKLTNYLV 229
           GP      F++ +  W+ K T +++
Sbjct: 771 GPMVWYQMFEYAIGHWLQKATEHVI 795


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 155 GPGYCLSFFDFLLFRWVDKLTNYLV 229
           GP      F++ +  W+ K T +++
Sbjct: 771 GPMVWYQMFEYAIGHWLQKATEHVI 795


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 267 KCRHLKWIVVNGIVKWLAYRYTTCKRSCDLDRK*ILFFL 383
           KC   KWI +   V +  + Y  C  +     K I  FL
Sbjct: 154 KCMKEKWIPLCNSVTFSNFGYKQCVENRKWQNKVIQKFL 192


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 267 KCRHLKWIVVNGIVKWLAYRYTTCKRSCDLDRK*ILFFL 383
           KC   KWI +   V +  + Y  C  +     K I  FL
Sbjct: 387 KCMKEKWIPLCNSVTFSNFGYKQCVENRKWQNKVIQKFL 425


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 267 KCRHLKWIVVNGIVKWLAYRYTTCKRSCDLDRK*ILFFL 383
           KC   KWI +   V +  + Y  C  +     K I  FL
Sbjct: 387 KCMKEKWIPLCNSVTFSNFGYKQCVENRKWQNKVIQKFL 425


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,175
Number of Sequences: 336
Number of extensions: 1989
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)