Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0075
         (395 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063041-1|AAH63041.1| 1129|Homo sapiens WD repeat and HMG-box D...    29   5.6  
BC043349-1|AAH43349.1|  612|Homo sapiens WDHD1 protein protein.        29   5.6  
BC005040-1|AAH05040.1|  613|Homo sapiens Unknown (protein for IM...    29   5.6  
BC000622-1|AAH00622.1|  613|Homo sapiens WDHD1 protein protein.        29   5.6  
AJ006266-1|CAA06932.1| 1129|Homo sapiens AND-1 protein protein.        29   5.6  
BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.       29   7.4  
BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536...    29   7.4  
BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536...    29   7.4  
BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536...    29   7.4  
AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.             29   7.4  

>BC063041-1|AAH63041.1| 1129|Homo sapiens WD repeat and HMG-box DNA
           binding protein 1 protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 54  CGTAGMSCAPTRALYTRVFTLDFLSKVSDIMANPVLVIASH 176
           C   G + A T AL  R+FT+  + K    +A PV+ +A H
Sbjct: 539 CLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGH 579


>BC043349-1|AAH43349.1|  612|Homo sapiens WDHD1 protein protein.
          Length = 612

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 54  CGTAGMSCAPTRALYTRVFTLDFLSKVSDIMANPVLVIASH 176
           C   G + A T AL  R+FT+  + K    +A PV+ +A H
Sbjct: 539 CLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGH 579


>BC005040-1|AAH05040.1|  613|Homo sapiens Unknown (protein for
           IMAGE:3615423) protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 54  CGTAGMSCAPTRALYTRVFTLDFLSKVSDIMANPVLVIASH 176
           C   G + A T AL  R+FT+  + K    +A PV+ +A H
Sbjct: 539 CLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGH 579


>BC000622-1|AAH00622.1|  613|Homo sapiens WDHD1 protein protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 54  CGTAGMSCAPTRALYTRVFTLDFLSKVSDIMANPVLVIASH 176
           C   G + A T AL  R+FT+  + K    +A PV+ +A H
Sbjct: 539 CLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGH 579


>AJ006266-1|CAA06932.1| 1129|Homo sapiens AND-1 protein protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 54  CGTAGMSCAPTRALYTRVFTLDFLSKVSDIMANPVLVIASH 176
           C   G + A T AL  R+FT+  + K    +A PV+ +A H
Sbjct: 539 CLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGH 579


>BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPECLWDCGHVLRTY-TGVVHARFHAR 118
           ++  EC  DCG V RTY   VVH+R H R
Sbjct: 628 EKPTECP-DCGRVFRTYHQVVVHSRVHKR 655


>BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPECLWDCGHVLRTY-TGVVHARFHAR 118
           ++  EC  DCG V RTY   VVH+R H R
Sbjct: 628 EKPTECP-DCGRVFRTYHQVVVHSRVHKR 655


>BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPECLWDCGHVLRTY-TGVVHARFHAR 118
           ++  EC  DCG V RTY   VVH+R H R
Sbjct: 628 EKPTECP-DCGRVFRTYHQVVVHSRVHKR 655


>BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPECLWDCGHVLRTY-TGVVHARFHAR 118
           ++  EC  DCG V RTY   VVH+R H R
Sbjct: 628 EKPTECP-DCGRVFRTYHQVVVHSRVHKR 655


>AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPECLWDCGHVLRTY-TGVVHARFHAR 118
           ++  EC  DCG V RTY   VVH+R H R
Sbjct: 640 EKPTECP-DCGRVFRTYHQVVVHSRVHKR 667


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,304,930
Number of Sequences: 237096
Number of extensions: 1280938
Number of successful extensions: 1938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)