Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0072
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 38 0.010
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.023
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 36 0.041
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.041
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 35 0.054
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 34 0.12
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 34 0.12
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 34 0.12
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 34 0.12
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 34 0.12
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 33 0.29
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 32 0.38
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 32 0.50
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 32 0.50
SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7) 32 0.50
SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) 31 0.67
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.67
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 31 1.2
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 31 1.2
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 1.5
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 30 1.5
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 30 1.5
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37253| Best HMM Match : Atrophin-1 (HMM E-Value=0.68) 29 2.7
SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) 29 2.7
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 2.7
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 29 3.6
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 6.2
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 28 8.2
SB_22100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_57471| Best HMM Match : TatC (HMM E-Value=0.27) 28 8.2
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34) 28 8.2
SB_21877| Best HMM Match : TF_Otx (HMM E-Value=3.1) 28 8.2
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 28 8.2
SB_4715| Best HMM Match : FlpD (HMM E-Value=1.1) 28 8.2
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 19/190 (10%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP- 306
G Y +C+ + C NG C + L +D + C++ V+CG+R + P
Sbjct: 524 GKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGR-----CEWADTVDCGQRPTISPH 578
Query: 307 ------------PISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESR 447
P +P C + G + D + C+ F C NG A + C L +D +
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638
Query: 448 VCMWADQVPECKNEEVANGFGC-PAP----GEVSNAGSFSRHAHPEDCRKYYICLEGVAR 612
C W ++V CK+ + P P E R+ P +C Y +C G
Sbjct: 639 ECEWPNKV-NCKSRPTTVPYVTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIY 697
Query: 613 EYGCPIGTVF 642
C G F
Sbjct: 698 FRNCRRGLRF 707
Score = 58.8 bits (136), Expect = 4e-09
Identities = 49/190 (25%), Positives = 66/190 (34%), Gaps = 19/190 (10%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER---TQL 300
G Y +C+ + C N + C L F+ T T++CD NV+CG T
Sbjct: 449 GDYQDPDACEGFISCSNHITYHMPCPENLRFNPT-----TKHCDNPENVQCGPTRPPTPK 503
Query: 301 EPPIS------TPHC-SRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 459
PP + +P C + G + D N C+ F C NG C L YD C W
Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEW 563
Query: 460 ADQV---------PECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAR 612
AD V P P +A P +C + C G A
Sbjct: 564 ADTVDCGQRPTISPHPPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAY 623
Query: 613 EYGCPIGTVF 642
+ CP F
Sbjct: 624 KRDCPFNLKF 633
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Frame = +1
Query: 277 ECGERTQLE--PPISTPHCS-RLYGIFPDENKCDVFWNCWNG-EASRYQCSPGLAYDRES 444
+C R QL P + + C+ R G + D + C+++ C NG + C GLA++
Sbjct: 298 KCYIRKQLPNLPLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357
Query: 445 RVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGC 624
+C + VP C +GF C + S + +C + +C G C
Sbjct: 358 GMCDYPSNVPGCSGSS-GSGF-C-------HEKSDGNYKDSGNCHGFIMCSNGHTYHMTC 408
Query: 625 PIGTVF 642
P T F
Sbjct: 409 PGQTNF 414
>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 41.9 bits (94), Expect = 5e-04
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +2
Query: 302 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSA 481
+P S +TV+ T ++ T+ + + E PP P T+ + C +SA
Sbjct: 327 TPISSDITVKSSTTTN-NNTANSVTQIRQKEGPPKRRIVPTPSPTDIDSKPCE--NNKSA 383
Query: 482 KTKK*QT-DSAAQPPVRS--PTLARSAVTLIPKIAVNITSVSRALPASTVA--PSEPFSR 646
++ K Q+ +S+ PP R PTL + +P + N S+ALP +A P P
Sbjct: 384 ESSKQQSLNSSEVPPKRRIIPTLVIGSKCPVPDASENSAEKSKALPVKRIAPLPISPGGF 443
Query: 647 SETPTALVTAKT 682
S+ PTA+ + T
Sbjct: 444 SDNPTAICSEST 455
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 37.9 bits (84), Expect = 0.008
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +2
Query: 359 TSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT 538
T AT T KP + P P+ +P S + T T S P +PT
Sbjct: 16 TKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAP-----TQTTPTPTTPSPTAPTQTTPT 70
Query: 539 LAR-SAVTLIPKIAVNITS-VSRALPASTVAPSEPFSRSETPTA-LVTAKTP 685
A + T PK TS +++ PA+T P++P + TPT TA TP
Sbjct: 71 PATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTP 122
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 340 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 471
GI+ ++ C F C G A + C PGL ++ + VC W+ +V
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
G Y +C + C G+A KTC GL F+ TD CD+ H V+C
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN-TDLMV----CDWSHEVKC 509
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 556 HAHPEDCRKYYICLEGVAREYGCPIGTVF 642
+A E+C + +C G+A + CP G +F
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIF 494
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 36.7 bits (81), Expect = 0.018
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 338 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 517
+ASS+++ S++ S + ++ AP + TTE A+ +A+T T SA+
Sbjct: 196 SASSVIQASSSTSAVVASSSAVIMTNAPKITTTEQLATT------TAAETTPTTTTSAST 249
Query: 518 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTAL-VTAKTPK 688
+ ++V+ S + A +TV ++P S ET T L TA TPK
Sbjct: 250 TTATTTKATTTSVSTTTATTKEEESTTTA-ETTTVTATKPLSSEETSTMLPTTAPTPK 306
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 310 ISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQ 468
+S+ C + G++ DE F C+NG +C+ GL ++ + ++C DQ
Sbjct: 2 LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 35.9 bits (79), Expect = 0.031
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 362 SATFSGTAGTEKPPAI--SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 535
S++ +G TEK + S+ LPT+ +PA+ S K +T P S
Sbjct: 120 SSSSTGQTPTEKTDSTPKSSGSTLPTSSTPATQNPTDSSLSTKPPTKKTGETQSPTENSI 179
Query: 536 TLARSAVTLIPKIAVNITSVSRALPASTVAPSE 634
+ SA T P + + TS + A P S+ P E
Sbjct: 180 STEESATTPTPSGSTSPTSPNNASPQSSTRPGE 212
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP 306
G+Y C ++++CD A L C GL + T + CD+ NV+C +T P
Sbjct: 789 GYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKT-----TCDWPRNVDCDRKTP-TP 842
Query: 307 PISTP 321
P TP
Sbjct: 843 PSPTP 847
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAE--LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLE 303
G+Y C +++ C G AE L C GL + + + CDY H V+C T
Sbjct: 574 GYYADPKDCAQFYFC-YGSAESLLSRCPRGLLWSV-----VKKTCDYPHLVDCSRPT--T 625
Query: 304 PPIST 318
PP++T
Sbjct: 626 PPVTT 630
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 310 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GEASRYQCSPGLAYDRESRVCMWADQV 471
+ T C + G + D C F+ C A ++CSPGL + C W V
Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV 833
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +2
Query: 296 SLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFR 475
S++P S + + C + TS+ S AGT++PP + AP P ++ G F
Sbjct: 378 SVAPTSLFGSAKSCAPETKTTTSSN-SLLAGTQQPPTTTTAPVFGQPGKPVASLGTGLFG 436
Query: 476 SAKTKK*QTDSAAQPPVRSPTLARSAVT 559
A+T + T + + + A S+ T
Sbjct: 437 QAETAETSTTAVSTQSISQAVSAPSSST 464
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 35.5 bits (78), Expect = 0.041
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 349 PDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 459
PD C +++C G+A R C PG +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 133 FYPHHISCDKYWKCDNGVAELKTCGNGLAFD 225
+ P SC Y+ C G A K CG G +D
Sbjct: 30 YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 310 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 474
+ST +R G +P + C ++ C NG A C GL ++ E + C W P
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
G YPH C Y C NG+A C GL ++ + KY CD+ N C
Sbjct: 92 GNYPHPDFCKMYIACSNGIAYEMPCPAGLNWN-DEKKY----CDWPFNAPC 137
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 556 HAHPEDCRKYYICLEGVAREYGCPIG 633
+ HP+ C+ Y C G+A E CP G
Sbjct: 94 YPHPDFCKMYIACSNGIAYEMPCPAG 119
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 556 HAHPEDCRKYYICLEGVAREYGCPIG 633
+AHP C Y C G+A E CP G
Sbjct: 344 YAHPSKCDMYITCSNGIAHEMPCPAG 369
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCD 261
G Y H CD Y C NG+A C GL ++ +T+ CD
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWND-----VTKECD 380
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 340 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 453
G + +KCD++ C NG A C GL ++ ++ C
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/96 (26%), Positives = 35/96 (36%)
Frame = +1
Query: 364 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAG 543
C + C N + +CSPG C + C + +A+ + C G SN
Sbjct: 366 CSIGHQCSNQTIAPVRCSPGEYAPAGQANCTACEAGTYCPDVPLASPYMC-TNGTYSNG- 423
Query: 544 SFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIG 651
R + C+ Y C G E C GT K G
Sbjct: 424 --QRQTSCQTCQAGYRCGSGAKSETACGDGTYSKEG 457
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 33.9 bits (74), Expect = 0.12
Identities = 32/125 (25%), Positives = 50/125 (40%)
Frame = +2
Query: 278 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 457
++E +++ +S R SLM A+ TA + P +AAP P T + A A
Sbjct: 7 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 64
Query: 458 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEP 637
+ + + T + A P +PT A +A V T+ A T AP+
Sbjct: 65 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAARVTPTAARVTPTAAPAAPVTPTAAPAPA 122
Query: 638 FSRSE 652
S E
Sbjct: 123 QSHEE 127
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 434 TESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAV---TLIPKIAVNITSVSRA 604
++S SA RS + + +A+ PV +PT A +A T P V T+ A
Sbjct: 16 SKSKTSAARSSVIRSLMSAEASLTAASAAPV-TPTAAPAAPVTPTAAPAAPVTPTAAPAA 74
Query: 605 LPASTVAPSEPFSRSETPTALVT 673
T AP+ P + + P A VT
Sbjct: 75 RVTPTAAPAAPVTPTAAPAARVT 97
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 33.9 bits (74), Expect = 0.12
Identities = 32/125 (25%), Positives = 50/125 (40%)
Frame = +2
Query: 278 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 457
++E +++ +S R SLM A+ TA + P +AAP P T + A A
Sbjct: 164 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 221
Query: 458 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEP 637
+ + + T + A P +PT A +A V T+ A T AP+
Sbjct: 222 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAARVTPTAARVTPTAAPAAPVTPTAAPAPA 279
Query: 638 FSRSE 652
S E
Sbjct: 280 QSHEE 284
Score = 29.9 bits (64), Expect = 2.0
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +2
Query: 275 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
L+A H LS ++ + +S ++S S + A SAAP PT +PA+
Sbjct: 154 LAATMAHRLSTSEAHYNIQSKSKTSAARSSVIRSLMSAEASLTAASAAPVTPTA-APAAP 212
Query: 455 CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA-VTLIPKIAVNIT-SVSRALPASTVAP 628
+A T +AA +PT A +A VT A +T + +R P T AP
Sbjct: 213 VTPTAAPAAPV----TPTAAPAARVTPTAAPAAPVTPTAAPAARVTPTAARVTP--TAAP 266
Query: 629 SEPFSRSETP 658
+ P + + P
Sbjct: 267 AAPVTPTAAP 276
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 434 TESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAV---TLIPKIAVNITSVSRA 604
++S SA RS + + +A+ PV +PT A +A T P V T+ A
Sbjct: 173 SKSKTSAARSSVIRSLMSAEASLTAASAAPV-TPTAAPAAPVTPTAAPAAPVTPTAAPAA 231
Query: 605 LPASTVAPSEPFSRSETPTALVT 673
T AP+ P + + P A VT
Sbjct: 232 RVTPTAAPAAPVTPTAAPAARVT 254
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 359 TSATFSGTAGTEKPPAISAAP--DLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRS 532
T A +S T + P ++ AP D PTT SPA++ + T + +A
Sbjct: 283 TPAEYSTTPSVQ--PELTEAPQTDYPTTASPATSPSTVAQERETTMAHEATAAPATTTAP 340
Query: 533 PTLARSAVTLIPK-IAVNITSVSRALPASTVAP--SEPFSRSETPTALVTAKTPK 688
T + +++P+ + + + + + P +T+AP +E + ET A T P+
Sbjct: 341 ETTVITETSVVPETLKTTMAAETTSAPETTLAPESTENATAPETTIAPETTMAPE 395
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 497 QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTA 676
+T +AAQ V + T A T++P+ ++ + + A PA+T+AP E + +T A T
Sbjct: 3007 ETTAAAQTTVAAETTAAPETTIVPE-TTSVPATTDA-PATTLAP-ETTAAPKTTVAPETT 3063
Query: 677 KTPK 688
P+
Sbjct: 3064 VAPE 3067
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.1 bits (72), Expect = 0.22
Identities = 29/117 (24%), Positives = 45/117 (38%)
Frame = +2
Query: 335 CTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAA 514
CT + ++ + T T P+ + P P+T S S L S + T S
Sbjct: 633 CTCTLSTPSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTP-STPSTP 691
Query: 515 QPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTP 685
P T + + P + IT + + P++ AP P TP+ L T TP
Sbjct: 692 STPSMPNTPSTPSTPSTP--STPITPGTPSTPSTPSAPGTPI----TPSTLSTPSTP 742
Score = 33.1 bits (72), Expect = 0.22
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +2
Query: 302 SPQSPLLTVRDCTAS--SLMKTSATFSGTAGTEKPPAISAAPDLPTTES-PASACGLIRF 472
+P +P T S SL T +T S T T P+ + P+ P+T S P++ I
Sbjct: 657 TPSTPSTPSTPSTPSTPSLTHTPSTPS-TPSTPSTPSTPSMPNTPSTPSTPSTPSTPITP 715
Query: 473 RSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVA-PSEPFSRS 649
+ T T SA P+ TL+ + P ++ S ST++ PS P S
Sbjct: 716 GTPSTPS--TPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTP-SMP 772
Query: 650 ETPTALVTAKTP 685
TP+ T TP
Sbjct: 773 NTPSTPSTPSTP 784
Score = 32.3 bits (70), Expect = 0.38
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Frame = +2
Query: 302 SPQSPLLTVRDCTASSLMKTSATFS-GTAGTEKPPAISAAPDLPTTES-PASACGLIRFR 475
+P +P T S+ SA + T T P+ + P P+T S P++ I
Sbjct: 107 TPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPG 166
Query: 476 SAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVA-PSEPFSRSE 652
+ T T SA P+ TL+ + P ++ S ST++ PS P S
Sbjct: 167 TPSTPS--TPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTP-SMPN 223
Query: 653 TPTALVTAKTP 685
TP+ T TP
Sbjct: 224 TPSTPSTPSTP 234
Score = 30.3 bits (65), Expect = 1.5
Identities = 35/128 (27%), Positives = 51/128 (39%)
Frame = +2
Query: 302 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSA 481
+P +P CT S T +T S T T P+ +AP P+T S S S
Sbjct: 68 APSTPSTPSTPCTPS----TPSTPS-TPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPST 122
Query: 482 KTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPT 661
+ T SA P T + + P + T + + P++ + P P S TP+
Sbjct: 123 PS----TPSAPSTPSTPSTPSTPSTPSTP--STPSTPSTPSTPSTPITPGTP-STPSTPS 175
Query: 662 ALVTAKTP 685
A T TP
Sbjct: 176 APGTPITP 183
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 PAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFS- 376
P+ T + STP P+ + + S S T + S T +T S
Sbjct: 449 PSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSA 508
Query: 377 -GTAGTEKPPAISAAPDLPTTESPAS 451
GT GT P+ +AP P+T S S
Sbjct: 509 PGTPGTPSTPSTPSAPGTPSTPSTPS 534
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +2
Query: 392 EKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA---AQP--PVRSPTLARSAV 556
E P + AP + + P+ A R ++AKT+ QTDS+ ++P PV SPT + +
Sbjct: 472 EVPVQLEQAPSVEAGQEPSPAEFWSRLKNAKTQSKQTDSSPSTSKPATPVTSPTEGKQSH 531
Query: 557 TLIP 568
+ +P
Sbjct: 532 SQLP 535
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 32.3 bits (70), Expect = 0.38
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +1
Query: 151 SCDKYWKCDNGVAELKT-CGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 327
+CDK KC+N + C G + + + + E C N C + + I + HC
Sbjct: 107 TCDKNAKCNNTIGSYHCMCNPGFSGNGRNCTDIDE-C-VTGNHACDKNARCRNNIGSHHC 164
Query: 328 SRLYGIFPDENKCDVFWNCWNGEASRYQCSP-GLAYDR-ESRVCMWAD 465
+ G + + CD C +AS ++CSP + Y+ S VC D
Sbjct: 165 TCKSGFYGNGASCDDIDEC--RDAS-HKCSPHAICYNTLGSFVCSCKD 209
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 556 HAHPEDCRKYYICLEGVAREYGCPIG 633
+AHPE+C+ Y C + E CP G
Sbjct: 70 YAHPENCKMYITCSNKITYERQCPAG 95
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQ 297
G Y H +C Y C N + + C GL ++ D+K + CD+ N C E+ Q
Sbjct: 68 GDYAHPENCKMYITCSNKITYERQCPAGLNWN--DAK---KWCDWPKNAPCEEKCQ 118
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 100 QESFKCPDDFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNV 276
++ F D G Y C KY++CD+ +TC + L + A + CD+ +V
Sbjct: 67 EDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADV 121
Query: 277 ECGERTQLEPPISTPHCSRLYGIF 348
+C +R L+P + P S GI+
Sbjct: 122 DC-DRKPLKPRV--PDRSEKVGIW 142
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 502 GFGCPAPGEVSNAGSFS-RHAHPEDCRKYYICLEGVAREYGCPIGTVF 642
G PA E AG +A P+DC YY C +G + + CP G F
Sbjct: 217 GKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKF 264
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 103 ESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
E F G Y C Y++C G + K C +GL F+A L ++CD V C
Sbjct: 225 EKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNA-----LIKSCDEPSKVNC 279
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 361 CFHQGRCRTVSNSEEWRLGAQAVSSLRTQRCE-GSRSSRSSIWNLWRRKRDRCRRFSVRL 185
C+H + E RL A A+ L +QRC+ + + S +W+ R + FS L
Sbjct: 493 CYHGLSSAQLLQVHELRLLAHALLILSSQRCDTRTEKNLGSTLQVWQSFLSRVKHFSSFL 552
Query: 184 HRC 176
RC
Sbjct: 553 RRC 555
>SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7)
Length = 123
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 560 LIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
L P+ SVS +PASTV+ S P RS P+ ++A T
Sbjct: 19 LAPRAFATAPSVSE-VPASTVSSSSPLRRSPGPSGTISAST 58
>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
Length = 653
Score = 31.5 bits (68), Expect = 0.67
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Frame = +2
Query: 329 RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDS 508
+D +S+L G GT K A + AP+ P E P I+ + K Q+ +
Sbjct: 127 QDNNSSTLKGDEVINEGDTGTFK--ANTPAPEAPQEEEPPPLPPKIKKDHYQVPKVQSST 184
Query: 509 AAQPPVRSPTLARSAVTLIPKIAV-NITSVSRALPASTVAPSEPFSRSETPTALVTAK 679
PP + P L S T + V N ++ SR + + P P ++ P +K
Sbjct: 185 RPTPPPKPPHLKVSRTTSADALPVRNESAHSRHMSEGNL-PGIPLPKAPPPVTTCFSK 241
>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.5 bits (68), Expect = 0.67
Identities = 34/122 (27%), Positives = 51/122 (41%)
Frame = +2
Query: 296 SLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFR 475
S++P S L ASS TSAT S A + P S A +T + GL
Sbjct: 284 SITPISSLQPPTFTVASSSSSTSATTSNIASSAPAPISSTA----STTTLLGQQGLTS-S 338
Query: 476 SAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSET 655
S T +A+ P + L + AV+ +P ++ S PA + + S+P +
Sbjct: 339 SFATNLVGQQTASSTPSTTSLLGQQAVSSVPFPTNLLSQPSITSPAVSSSSSQPVTNLFG 398
Query: 656 PT 661
PT
Sbjct: 399 PT 400
>SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 263
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +1
Query: 151 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 327
+CDK KCDN + C G + D + + E H C + + I + HC
Sbjct: 86 TCDKNAKCDNTIGSYHCMCNPGFSGDGRECTDIDECVTGDHT--CDKNAKCNNIIGSYHC 143
Query: 328 SRLYGIFPDENKCDVFWNCWNGE 396
+ G D C C G+
Sbjct: 144 TCNPGFSGDGRNCTDIDECLTGD 166
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 307 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGL 426
P++ C ++YG+ C W GE +R+Q +PG+
Sbjct: 100 PLAANPCRQVYGVPLGGIGCGTIGRGWRGEFNRWQLTPGI 139
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 31.1 bits (67), Expect = 0.88
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Frame = +2
Query: 389 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIP 568
T K P +AAP+ T E +A T +T A + T A T+ P
Sbjct: 483 TTKAPESAAAPET-TKEPETTAAPDTTAAPETTVAPETTIAPETTATPETTAAPETTVAP 541
Query: 569 KIAVNITSVSRALPASTVAP-----SEPFSRSETPTALVTAKTPK 688
+ +T + A P +T AP SE + SET A T PK
Sbjct: 542 E--TTMTPETTAAPETTTAPETTAASETTAASETTAAPKTTAAPK 584
Score = 27.9 bits (59), Expect = 8.2
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +2
Query: 356 KTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 535
KT+A T T+ +AAP+ TT P + KT +T +A + S
Sbjct: 331 KTTAAHETTVATKT----TAAPE--TTSVPETTA--TNTAPDKTAVPKTTTAPETTDASK 382
Query: 536 TLARSAVTLI---PKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
T + T P+I+V I++ + P TVAP T + TA+T
Sbjct: 383 TTVETQQTTYSRDPEISVTISTQPKKAPGITVAPETTVVPETTVASETTAET 434
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 364 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPG 525
C F +C N AS C GL Y+ +++ C W V +C + G G G
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DCPMGNLDCGVGIVGGG 143
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 151 SCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
+C + C N A K C GL ++ T+ CD+ NV+C
Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEK-----TKQCDWPRNVDC 128
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +2
Query: 467 RFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSR 646
RF A+ K T +A PP +P A T P A T+ A PA+T P+ +
Sbjct: 107 RFMRAQRK---TPAATTPPTGAP-----AATTPPTAAPAATTPPTAAPAATTPPTGAPAA 158
Query: 647 SETPTALVTAKTP 685
+ PT A TP
Sbjct: 159 TTPPTGAPAATTP 171
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 124 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 300
D G Y C KY++CD+ +TC L + A + CD+ +V+C +R L
Sbjct: 26 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSA-----VKNICDHAADVDC-DRKPL 79
Query: 301 EPPISTPHC 327
+P HC
Sbjct: 80 KPRCDL-HC 87
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 124 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 300
D G Y C KY++CD+ +TC + L + A + CD+ +V+C +R L
Sbjct: 8 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADVDC-DRKPL 61
Query: 301 EP 306
+P
Sbjct: 62 KP 63
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 541 GSFSRHAHPEDCRKYYICLEGVAREYGCPIGT 636
G + + C K + C EG+ E CP+GT
Sbjct: 868 GGLTNVSEATSCSKAHYCPEGIEAEVPCPVGT 899
>SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +2
Query: 431 TTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALP 610
TT+ P + + + ++ Q + P +SPT S I N T + A
Sbjct: 592 TTQLPTTQLPTTQMPTTQSPTAQMSTTQSPTAQSPTAQMSTTDAGDIIRGNTTQLPTAQM 651
Query: 611 ASTVAPSEPFSRSETPTA 664
++T +P+ +++PTA
Sbjct: 652 STTQSPTTQLPTTQSPTA 669
>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
Length = 976
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -2
Query: 343 CRTVSNSEEWRLGAQAVSSLRTQRCEGSRSSRS-SIWNLWRR---KRDRCRRFSVRL 185
CR +SN W+ A+ EGS S S S+ L R+ +RD+CRR ++
Sbjct: 187 CRLLSNEMSWQKRAEDTIRRAGVDSEGSDSEESPSVETLCRKLQSQRDQCRRLEAKI 243
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 560 LIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
L P SVS +PASTV+ S P RS P+ ++A T
Sbjct: 46 LAPCALATAPSVSE-VPASTVSSSSPLRRSPGPSGTISAST 85
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 370 VFWNCWNGEASRYQCSPG-LAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGS 546
++ C + + C L+Y S VC W+ + A F CP G V AG
Sbjct: 190 LYSRCHHDRVFSFACKYSRLSYTTGSEVCNWSSSY--VNSYLGAMSFTCPGNGFV--AGV 245
Query: 547 FSRHAHPEDCR--KYYICLEGVAREYGC 624
S H++ R K+ C + YGC
Sbjct: 246 HSEHSNSAGDRRFKFKCCSRLNVQRYGC 273
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/116 (25%), Positives = 47/116 (40%)
Frame = +2
Query: 338 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 517
T +S TS +G+ T P+ S TT + A + S T + S +
Sbjct: 77 TTTSAPSTSTPRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTT---SNSTTR--APSTST 131
Query: 518 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTP 685
P S R++ T + + TS+SRA ST S+P + + T + T P
Sbjct: 132 PRTGSTITLRTSTTSVMTTTPSTTSISRA--GSTTTTSDPSTSNITTSTGTTNPIP 185
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 497 QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTA 676
+T +A PP +P A T P A T+ A PA+T P+ + + PT A
Sbjct: 4 KTPAATTPPTGAP-----AATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAA 58
Query: 677 KTP 685
TP
Sbjct: 59 TTP 61
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +2
Query: 467 RFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSR 646
RF A+ K T +A PP +P A T P A T+ A PA+T P+ +
Sbjct: 174 RFMRAQRK---TPAATTPPTGAP-----AATTPPTAAPAATTPPTAAPAATTPPTGAPAA 225
Query: 647 SETPTALVTAKTP 685
+ PT + TP
Sbjct: 226 TTPPTGAPASTTP 238
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Frame = +2
Query: 359 TSATFSGTAGTEKPPAIS-AAPDLPTTESPASA-CGLIRFRSAKTKK*-QTDSAAQPPVR 529
T T + T++P LP+T+ P + F S K Q +A P +
Sbjct: 238 TQQTTTTLPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTK 297
Query: 530 SPTLARSAVTLIPKIAVNITSVS---RALPASTVAPSEPFSRSETP 658
PT + +P + T+VS R P P EP +E P
Sbjct: 298 QPTTTQQTTATLPTPSTKPTTVSPTTRQPPPEPTEPLEPTEPTEPP 343
>SB_37253| Best HMM Match : Atrophin-1 (HMM E-Value=0.68)
Length = 1113
Score = 29.5 bits (63), Expect = 2.7
Identities = 45/168 (26%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Frame = +2
Query: 188 PN*KPAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSA 367
PN P AT SL T + SA G + + + + + TA + +TSA
Sbjct: 206 PNHSPIATSSL-TNNLLKQDGCQNNKQQKFSAS-GSATNSSTTAIKPNNTTAITDNETSA 263
Query: 368 TFSG-TAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLA 544
+ T T +PTT ++A ++ +S S A
Sbjct: 264 AINTITVKTVGDTDTGRIITIPTTPIASNAITTVQSKSPTWT-----SNACTNTTGLIAV 318
Query: 545 RSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTAL-VTAKTP 685
R+A T IP A ++S+S AST AP+ P + T TA + A TP
Sbjct: 319 RTAATTIPASAT-VSSISTTASAST-APTNPSFATTTVTATSICASTP 364
>SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)
Length = 877
Score = 29.5 bits (63), Expect = 2.7
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = -3
Query: 444 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSALNVVK 265
G+ VVG S G SV V ++VF+ R+V +G S + V +
Sbjct: 471 GVFVVGSSVVVDFGSGSSVVGVIGGSSVVFV------GRSVVTG------VGRSVVGVSR 518
Query: 264 VVAVLGQVFGIC--GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEG 106
V+ G V GI GV + G GY+VVA+ V G V V VVG G
Sbjct: 519 VIVGSGVVVGISRSGVVCISFVVGVVVGYSVVAVYSSVVG--VVVGNSVVGVCSG 571
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 574 CRKYYICLEGVAREYGCPIGTVFKIGDADGTGNC 675
C + + C G RE CP GT + A G+C
Sbjct: 31 CVRGHYCPAGTTREIPCPSGTYYPDEGAKAVGDC 64
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +2
Query: 467 RFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSR 646
RF A+ K T +A PP +P A T P A T+ A PA+T P+ +
Sbjct: 60 RFMRAQRK---TPAATTPPTGAP-----AATTPPTAAPAATTPPTAAPAATTPPTGAPAA 111
Query: 647 SETPTALVTAKTP 685
+ PT + TP
Sbjct: 112 TTPPTGAPASTTP 124
>SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 29.5 bits (63), Expect = 2.7
Identities = 45/168 (26%), Positives = 64/168 (38%), Gaps = 5/168 (2%)
Frame = -3
Query: 567 GMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAG 400
G+SV + A SV + G A+ S A L A AGLSV G S +AG
Sbjct: 5 GLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSVASASAGLSVAGASAGLSVAG 64
Query: 399 GFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGICGV 223
+ +V A + + A +V GL + SA L+V A L + G
Sbjct: 65 ASAGLSVASASAGLSV-ASASAGLSVAGASAGLSVAGASAGLSVASASAGL----SVAGA 119
Query: 222 ESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEGLLGHSYAEG 79
+ AG G +V + ++ V GA GL S + G
Sbjct: 120 SAGLSVAGASAGLSVASASAGLSVASASAGLSVAGASAGLSAASASAG 167
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +1
Query: 499 NGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTGNCE 678
N F C A G SN R E C + + C EG + CP GT + A +C+
Sbjct: 388 NQFPC-ASGTYSNKTGNVRWEQCEPCIEGHYCPEGTSVPTKCPRGTYNDVLSAKSPTDCK 446
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +1
Query: 460 ADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTV 639
A + P + + A GF C G + S + C C G A GCP GT
Sbjct: 1126 AKEFPSSNSGDCAAGFYC-VQGVNTPRPSTNFSGIGGVCPPGAYCPLGTAEPIGCPNGTF 1184
Query: 640 FKIGDADGTGNC 675
+ + G+C
Sbjct: 1185 SNVSQLESAGDC 1196
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 151 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 327
+CDK KCDN + TC G + + + T+ C + C + + I + HC
Sbjct: 534 TCDKNAKCDNTIGSYHCTCNPGFSGNGRECTD-TDEC-VTGDHTCDKNARCGNTIGSYHC 591
Query: 328 SRLYGIFPDENKCDVFWNCWNGE 396
+ G + +C C G+
Sbjct: 592 TCNPGFSGNGRECTDIDECVTGD 614
>SB_56839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 VTVSTTLVPGLSS-QYVFEVFISVSGRPRRSCGPRVLQ 113
VTV+ T+ S+ Q V E+F + SGR RR G RV Q
Sbjct: 161 VTVARTITSQSSNRQRVCEIFGNTSGRSRRVRGKRVQQ 198
>SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 208 NGLAFDATDSKYLTENCDYLHNVECGERT-QLEPPISTPHCSRLYGIFPDENKCDVFWNC 384
+ LAF A+ + L + + C + + PP ST C + + D+ C N
Sbjct: 272 SSLAFSASSADQLGVQREAVEKAMCSAKPGKCPPPFSTGFCPDITDVPSDQVPCGPSIND 331
Query: 385 WNGEASRYQCSPG 423
G+++ ++C PG
Sbjct: 332 PKGKSNDWEC-PG 343
>SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.7 bits (61), Expect = 4.7
Identities = 38/145 (26%), Positives = 51/145 (35%), Gaps = 3/145 (2%)
Frame = -3
Query: 528 LTGGWAAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAG---GFSVPAVPENVALV 358
L GG + S A L A AGLSV G S +AG G SV +++
Sbjct: 169 LAGGVGSASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASAGLSVAGASAGLSVA 228
Query: 357 FIREDAVQSRTVRSGDWGLKLCPLSALNVVKVVAVLGQVFGICGVESETVAAGFQFGYTV 178
A +V S GL + SA VA F + G + A G +V
Sbjct: 229 ----GASAGLSVASASAGLSVASASA---GLSVAGASAGFSVAGASAGLSVASASAGLSV 281
Query: 177 VALPVFVTGDVVRVETEVVGAFEGL 103
+ ++ V GA GL
Sbjct: 282 ASASAGLSVASASAGLSVAGASAGL 306
Score = 28.7 bits (61), Expect = 4.7
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 5/179 (2%)
Frame = -3
Query: 684 GVFAVTSAVGVSDLENGSDGATVLAGNALETDVIFTAIFGMSVTAERA--SVGDLTGGW- 514
G+ ++ G+S + S G +V + +A + + +A G+SV A SV + G
Sbjct: 215 GLSVAGASAGLS-VAGASAGLSVASASAGLS--VASASAGLSVAGASAGFSVAGASAGLS 271
Query: 513 -AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAV 337
A+ S A L A AGLSV G S +AG + +V A + + A
Sbjct: 272 VASASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASAGLSVASASAGLSV-ASAS 330
Query: 336 QSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGICGVESETVAAGFQFGYTVVALPV 163
+V S GL + SA L+V A L G+ +AG L V
Sbjct: 331 AGLSVASASAGLSVASASAGLSVAGASAGLSVAGASAGLSVAGASAGLSVAGASAGLSV 389
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +1
Query: 460 ADQVPECKNEEVANGFGCPAPGEVSNAGSF----SRHAHPEDCRKYYICLEGVAREYGCP 627
A Q C + G AP AG + ++ A+P DC + C G E CP
Sbjct: 1696 ASQPIPCDPGKFCGHDGLAAPQGNCTAGFYCNGSNKVANPVDCAAGHYCPSGTPIEVPCP 1755
Query: 628 IGT 636
GT
Sbjct: 1756 TGT 1758
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.3 bits (60), Expect = 6.2
Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 1/136 (0%)
Frame = +2
Query: 278 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 457
S R HS + + + T+ S +KT++T + T PP TT +P +
Sbjct: 1733 STNRVHSRAQEGQIPTL------STLKTTSTSTSTTKYIPPPHSPPTTTTTTTTTPETTA 1786
Query: 458 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRA-LPASTVAPSE 634
T + T P P + T PK T+ +A LP + S
Sbjct: 1787 PRTTTPETTTPETTTPRTTTPETTKPR-TTTPKTTTPK---KTTAAKKAPLPVTHATTSH 1842
Query: 635 PFSRSETPTALVTAKT 682
S +E PT A T
Sbjct: 1843 APSTTENPTTARPATT 1858
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +1
Query: 388 NGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHP 567
+ + Y C+PG +D CM + N CP GS ++
Sbjct: 637 SSSSCEYTCTPGQYFDTLKANCMTCPEGTYQNEVGKVNCTSCPPGLATLTTGSTNK---- 692
Query: 568 EDCRKYYICLEG 603
EDCRK IC +G
Sbjct: 693 EDCRK--ICGKG 702
>SB_22100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 560 LIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
L P+ SVS +PASTV S P S P+ ++A T
Sbjct: 467 LAPRAFATAPSVSE-VPASTVPSSSPLRCSPGPSGTISAST 506
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 109 FKCPDDFGFYPHHISCDKYWKCDNGVAELKTC 204
+ CP GF+P S +Y C E+ +C
Sbjct: 2177 YDCPTSDGFFPDPASNGRYIHCSGNSPEIMSC 2208
>SB_57471| Best HMM Match : TatC (HMM E-Value=0.27)
Length = 687
Score = 27.9 bits (59), Expect = 8.2
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Frame = +2
Query: 302 SPQSPLLTVRDCT-ASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRF-R 475
+P SP +T+ T A+S M S+T S + T A AA PT SP+S +
Sbjct: 235 APTSPNVTINRTTEANSTMILSST-SVSYNTTLTSAPDAASTAPTAISPSSVGNMTTLVS 293
Query: 476 SAKTKK*QTDSAAQPPVRSPTLA-RSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSE 652
S + + P +R+ L+ + V + P +TS + + A S +
Sbjct: 294 SVNLTRSSLSTTLIPSIRTSILSYNTTVIVTPNTTRLVTSKISSFTVNVSANSTTSLIQQ 353
Query: 653 TPTALVT 673
T + T
Sbjct: 354 NITLITT 360
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/79 (26%), Positives = 28/79 (35%)
Frame = +2
Query: 209 TVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAG 388
T +TP P L+ E L P P + T + T A S T
Sbjct: 892 TAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQA--STTRP 949
Query: 389 TEKPPAISAAPDLPTTESP 445
T PP + P +P T+ P
Sbjct: 950 TPPPPTSALPPPIPATQVP 968
>SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34)
Length = 174
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +1
Query: 406 YQCSPGLAYDRESR-VC---MWADQVPECK 483
Y+C PG D +++ VC W+ VPECK
Sbjct: 144 YRCDPGTDPDGQTQLVCNDGRWSSPVPECK 173
>SB_21877| Best HMM Match : TF_Otx (HMM E-Value=3.1)
Length = 154
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 560 LIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
L P+ SVS +PASTV S P S P+ ++A T
Sbjct: 50 LAPRAFATAPSVSE-VPASTVPSSSPLRCSPGPSGTISAST 89
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/82 (24%), Positives = 29/82 (35%)
Frame = +1
Query: 388 NGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHP 567
NG+ +C G YD CM +E + CP + + +
Sbjct: 264 NGKWLMVRCPAGTYYDSLHEKCMRCKPGTYSSHEGSLKCYSCPEGSWTLGDEAKNFTSCT 323
Query: 568 EDCRKYYICLEGVAREYGCPIG 633
E C+ Y G+AR CP G
Sbjct: 324 EKCKPGYYSSTGLARCTICPRG 345
>SB_4715| Best HMM Match : FlpD (HMM E-Value=1.1)
Length = 705
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 560 LIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
L P+ SVS +PASTV S P S P+ ++A T
Sbjct: 101 LAPRAFATAPSVSE-VPASTVPSSSPLRCSPGPSGTISAST 140
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 560 LIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 682
L P+ SVS +PASTV S P S P+ ++A T
Sbjct: 555 LAPRAFATAPSVSE-VPASTVPSSSPLRCSPGPSGTISAST 594
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,477,444
Number of Sequences: 59808
Number of extensions: 502591
Number of successful extensions: 1888
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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