Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0071
         (416 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.60 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.60 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   1.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   4.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.60
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 179 INSRRGTNLFQVAAHEFGHSLGLSHSDVRSAL 274
           +NS   T L ++   +FG  L  SH   ++AL
Sbjct: 515 LNSLSATKLSKIILMQFGDKLESSHDSFQAAL 546


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.60
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 179 INSRRGTNLFQVAAHEFGHSLGLSHSDVRSAL 274
           +NS   T L ++   +FG  L  SH   ++AL
Sbjct: 553 LNSLSATKLSKIILMQFGDKLESSHDSFQAAL 584


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 298 RSCFPTRSGRRPRNSVALWPQ 360
           R  FPT  G+ P N    WPQ
Sbjct: 31  RRPFPTFPGQGPFNPKIKWPQ 51


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 100 TIKRISVTVLAFLKPNFYVDL 38
           TI+ + V+ L  L  +FYVDL
Sbjct: 466 TIQNVDVSQLVTLFTDFYVDL 486


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
            receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +1

Query: 316  RSGRRPRNSVALWPQDPDRHXXXXXXTDTFRSS 414
            RS   PR+    WP D D        +D  R S
Sbjct: 908  RSNVTPRSPGRAWPGDSDIRQRPIPRSDDIRLS 940


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,570
Number of Sequences: 438
Number of extensions: 2195
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)