Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0070
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DXP1 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q892Y2 Cluster: Sensor protein; n=4; Clostridium|Rep: S...    33   6.3  
UniRef50_Q8TII6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q46FH9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  

>UniRef50_A2DXP1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 595

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 592 TREHNENIQKTNSKHVVLLPTSIDFDESNRYIPEIIGEYLILKNF 458
           TR  + N  ++N KHV+ +  +  FD+ ++Y  +I+  Y  LKNF
Sbjct: 533 TRNSSSNEHESNDKHVLSIEDA--FDDLDKYCSDIVSCYQTLKNF 575


>UniRef50_Q892Y2 Cluster: Sensor protein; n=4; Clostridium|Rep:
           Sensor protein - Clostridium tetani
          Length = 471

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = -1

Query: 664 GQKSESEEKIDLNILLKFVKKFDGTREHNENIQKTNSKHVVLLPTSIDFDESNRYIPEII 485
           G+ +  +EK+DLN ++ +++K+   R   EN+Q    K+  L    ID D   +    I+
Sbjct: 308 GKVTIKKEKVDLNEVISYIEKYLSPRAKRENVQFIVEKNYDLPIMYIDVDRMKQVFINIL 367


>UniRef50_Q8TII6 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina acetivorans|Rep: Putative uncharacterized
           protein - Methanosarcina acetivorans
          Length = 563

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 255 FNCGVNYLKHDYGEIKKGLYTNSLIGDPDV 166
           F+  VN+L+ + G+ KKG  TNS +GDP++
Sbjct: 56  FSEAVNFLQENGGKAKKGNATNSRLGDPNL 85


>UniRef50_Q46FH9 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina barkeri str. Fusaro|Rep: Putative
           uncharacterized protein - Methanosarcina barkeri (strain
           Fusaro / DSM 804)
          Length = 417

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -2

Query: 255 FNCGVNYLKHDYGEIKKGLYTNSLIGDPDV 166
           F   VN +K + G++KKG  TNS +GDP++
Sbjct: 56  FTEAVNCIKENGGKVKKGNATNSRLGDPNL 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,020,788
Number of Sequences: 1657284
Number of extensions: 12381110
Number of successful extensions: 31659
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31642
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)