Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0066
         (310 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   1.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   2.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   5.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   6.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       19   9.0  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +1

Query: 22  NTNPIKSRASQNLPPD-WK 75
           NT P+ S A  NLP + WK
Sbjct: 67  NTEPLLSEALTNLPGEKWK 85


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 120 TDTNEFLAKSSQWVAF 73
           T  N  + K  QWVAF
Sbjct: 318 TQKNTHMYKGDQWVAF 333


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 280 WRPPAYNTEWSAAPHRHFGSFRSTNSAFRFLKHQSSF 170
           +R  A    W A     +GS ++ N+   FL  Q  F
Sbjct: 201 FRVDAAKHMWPADLEAIYGSLKNLNTDHGFLDGQKPF 237


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 280 WRPPAYNTEWSAAPHRHFGSFRSTNSAFRFLKHQSSF 170
           +R  A    W A     +GS ++ N+   FL  Q  F
Sbjct: 201 FRVDAAKHMWPADLEAIYGSLKNLNTDHGFLLGQKPF 237


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 46  ASQNLPPDWKRDPLRR 93
           AS N  PD  +D LRR
Sbjct: 134 ASPNRKPDDNQDHLRR 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,579
Number of Sequences: 336
Number of extensions: 1210
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)