Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0066
         (310 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   3.4  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   3.4  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   3.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   4.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    21   7.9  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 52  QNLPPDWKRDPLRRFG 99
           QNL   W RD + RFG
Sbjct: 333 QNLALRWVRDNIHRFG 348


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 52  QNLPPDWKRDPLRRFG 99
           QNL   W RD + RFG
Sbjct: 333 QNLALRWVRDNIHRFG 348


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 52  QNLPPDWKRDPLRRFG 99
           QNL   W RD + RFG
Sbjct: 219 QNLALRWVRDNIHRFG 234


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 144  FVASDAFDENDDWCL 188
            F +SD +DE DD+ L
Sbjct: 1331 FYSSDEYDEEDDYYL 1345


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 231  ILDPSDPLTVLLGSLNTS 178
            ILDPSD   V+ G++ TS
Sbjct: 1096 ILDPSDGAAVVGGNVLTS 1113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,293
Number of Sequences: 2352
Number of extensions: 5269
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)