Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0064
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 170 4e-43
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 40 0.001
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 36 0.017
02_01_0522 + 3779404-3779439,3779594-3779709,3780120-3780327,378... 30 0.87
09_04_0693 - 19518331-19518426,19518541-19518705,19518811-195188... 29 1.5
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 29 1.5
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 29 2.6
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 28 3.5
04_04_0339 - 24513699-24516827 27 6.1
11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778... 27 8.1
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 27 8.1
>09_02_0058 -
3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 170 bits (414), Expect = 4e-43
Identities = 85/162 (52%), Positives = 115/162 (70%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D H++P + + D SWRVRYMVA++ EL +AVGPE +R L +
Sbjct: 226 CAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALAS 364
LL+D+EAEVR AAAGKV FC L + + ILP +K+L D++QHV+SALAS
Sbjct: 286 VRLLRDNEAEVRIAAAGKVTKFCRIL----SPQLAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
VIMG++P++G++ TIE LLP+FL+ LKDE P+VRLNIIS L+
Sbjct: 342 VIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 59.7 bits (138), Expect = 1e-09
Identities = 36/150 (24%), Positives = 67/150 (44%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQ 400
AAA +K L + M I+PQ+ + + + + + + I L+P++G +
Sbjct: 454 DAAANNLK----RLAEEFGPEWAMQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAE 509
Query: 401 NTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
T + LLP+ + KD P ++ N+ L+
Sbjct: 510 ITCQQLLPVVINSSKDRVPNIKFNVAKVLQ 539
Score = 44.4 bits (100), Expect = 5e-05
Identities = 37/151 (24%), Positives = 61/151 (40%)
Frame = +2
Query: 26 LAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDS 205
+ PE + ++P D VR A K + + + P+LA + + L DS
Sbjct: 272 VGPEHSREQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPCVKELSSDS 331
Query: 206 EAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSP 385
VR+A A + L K ++ + L +KD D ++ S L V +
Sbjct: 332 SQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQV----NQ 387
Query: 386 IVGRQNTIEHLLPLFLTQLKDECPEVRLNII 478
++G + LLP + +D VRL II
Sbjct: 388 VIGIDLLSQSLLPAIVELAEDRHWRVRLAII 418
Score = 27.5 bits (58), Expect = 6.1
Identities = 22/115 (19%), Positives = 43/115 (37%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+A PE QH++P V + + + R + L +G E+ L +
Sbjct: 463 LAEEFGPEWAMQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLPVVINS 522
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSAL 358
KD ++ A ++ LD++ E + ++ +D D + AL
Sbjct: 523 SKDRVPNIKFNVAKVLQALIPILDQSVVEKNVKPCLVELSEDPDVDVRYYANQAL 577
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/133 (24%), Positives = 57/133 (42%)
Frame = +2
Query: 53 VMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAA 232
+M T+ + +S R + EL + +G E + I LKD +A R
Sbjct: 1846 LMDTLISSLASSSSERRQVAGRSLGELVRKLG-ERVLPSIIPILSQGLKDPDASRRQGVC 1904
Query: 233 GKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIE 412
+ + + K HQ M +++P I+ +CD+ Q V+ + L G Q I+
Sbjct: 1905 IGLSEVMGSAGK-HQLLSFMDLLIPTIRTALCDSTQEVRESAGLAFSTLYKSAGLQ-AID 1962
Query: 413 HLLPLFLTQLKDE 451
++P L L+D+
Sbjct: 1963 EIVPTLLRALEDD 1975
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 35.9 bits (79), Expect = 0.017
Identities = 27/102 (26%), Positives = 48/102 (47%)
Frame = +2
Query: 170 LAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVK 349
L++I + KDS EVR + + LD Q H I+ ++LP++ D+V D V+
Sbjct: 410 LSKIVDDISKDSCTEVRVST---INGLIYLLDNP-QSHEILKVLLPRLSDMVSDPALSVR 465
Query: 350 SALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNI 475
S+ +++ + + Q L L+ L ++ P V I
Sbjct: 466 SSAVDLLLAIRDLRSFQFNKVVGLGTLLSSLSNDHPRVAQKI 507
>02_01_0522 +
3779404-3779439,3779594-3779709,3780120-3780327,
3781446-3781611,3781713-3781842,3782496-3782619,
3782794-3782844,3783140-3783262,3783504-3783602,
3783680-3783790,3783868-3783957,3784035-3784175,
3787913-3788116,3788154-3788290,3788429-3788662,
3789535-3789829,3789963-3790017,3790144-3790245,
3790581-3790669,3790807-3790899
Length = 867
Score = 30.3 bits (65), Expect = 0.87
Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 3/154 (1%)
Frame = +2
Query: 29 APEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSE 208
A +D+E + TV + DTS V + L + VG E + ++ I L + +
Sbjct: 21 ADQDIEPKLTTTVLQQLEDTSGEVSGLAVKCLAPLVKKVG-EDSVVEMTNILCDKLLNGK 79
Query: 209 AEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQ-IKDLVCDANQHVKSALASVIMGLSP 385
+ R A+ +K + I+ + PQ IK + VK ++ +
Sbjct: 80 DQHRDTASIALKTIIAEVTTTTLAEKILVSLAPQLIKGATAGKSAEVKCECLDILGDVLH 139
Query: 386 IVGRQNTIEH--LLPLFLTQLKDECPEVRLNIIS 481
G T +H +L L+QL VR IS
Sbjct: 140 RFGNLITKDHDCMLTALLSQLSSNQASVRKKSIS 173
>09_04_0693 -
19518331-19518426,19518541-19518705,19518811-19518894,
19518986-19519054,19519176-19519241,19519347-19519484,
19519636-19519866
Length = 282
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 472 VESDFGTFILQLCEEQRQEMFNSVLSAHY 386
+ D G++I+Q E RQE+FN V+ +Y
Sbjct: 249 LSQDNGSYIMQTVGEPRQELFNQVVLNNY 277
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 155 ALDQQLVAALRTYQRP-CTAPSTKYLRHEPARSASHVAPYPRVPAEKPQQH 6
AL Q+ V + + Q P C PS+ + PA ++S +P V ++ QH
Sbjct: 807 ALSQEHVQSAQPQQLPDCARPSSSEMATTPATTSSQFSPSTAVTSQAQLQH 857
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 90 EVSPARARTVGITCCSISSGASREATTAH 4
EV+ ARA +TCC SS AT H
Sbjct: 596 EVAKARASATKVTCCHFSSDGKLLATGGH 624
>01_06_1127 -
34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = +2
Query: 26 LAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
L ED+ + PT+ G W++R D ++ + + T ++F AL
Sbjct: 815 LPREDISAKITPTLLKNLGSPDWKLRLESIDAVSKIVEEAHKRIQPTGTVELFTAL 870
>04_04_0339 - 24513699-24516827
Length = 1042
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -1
Query: 331 ITHQVLDLWQDHGHDDVFLMSFIQVHTEVLDLPSSCGSNLSLRVLE 194
++H +++ D + FL +F TE+ +LP S G +L+VL+
Sbjct: 592 LSHNDIEIIPDSICNLQFLKNFNLSRTEIAELPESVGKMQALQVLD 637
>11_02_0051 +
7776312-7780228,7780627-7780695,7781920-7781979,
7782225-7782324,7782720-7782801,7782928-7782940,
7783621-7783681
Length = 1433
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 283 VFLMSFIQVHTEVLDLPSSCGSNLSLRVLEQCLEDL 176
++ + F++VH +V +LP+ + LR LE+C L
Sbjct: 635 LYHLQFLRVHRDVNNLPAKICNLSKLRHLERCSPSL 670
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 90 EVSPARARTVGITCCSISSGASREATTAH 4
EV+ ARA T + CC SS AT H
Sbjct: 563 EVAKARASTNKVDCCHFSSDGKLLATGGH 591
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,932,130
Number of Sequences: 37544
Number of extensions: 274967
Number of successful extensions: 926
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -