Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0064
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   3.2  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   4.2  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   4.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.4  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -3

Query: 149 DQQLVAALRTYQRPCTAPSTKYLRHEPARSASHVAPYPRVPAEKP 15
           D   + A R  + P   P TK  R    +     +PY  VP+ +P
Sbjct: 198 DSDSMGASRHGKTPLATPPTKEKRKPFFKKQETSSPYDVVPSMRP 242


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 355 PSLRHHGPEP-HSGQTEHY*TSPAAV 429
           P + HH PEP H G T H   SP  V
Sbjct: 138 PGVPHHVPEPQHMGAT-HSCVSPEPV 162


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 355 PSLRHHGPEP-HSGQTEHY*TSPAAV 429
           P + HH PEP H G T H   SP  V
Sbjct: 138 PGVPHHVPEPQHMGAT-HSCVSPEPV 162


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 298  HGHDDVFLMSFIQVHTEVLDLPSSCGSNLSLRVLEQ 191
            HG+ ++ +     +HT+ L+     G+NL+L  L Q
Sbjct: 3288 HGNGNILMERLKALHTDALEEIELHGANLALDNLFQ 3323


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -1

Query: 196  EQCLEDLC*ICTS*L-W--TNSLLQLYELIS--DHVPHPPRSISG 77
            EQCLE+LC +  +   W    SLL  +   +  +  P P R + G
Sbjct: 1051 EQCLEELCRLLDAGSGWRELGSLLDFHSFFTVWEQAPSPARMLLG 1095


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,797
Number of Sequences: 2352
Number of extensions: 10534
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)