Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0064
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 145 1e-35
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 40 0.001
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 31 0.34
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 30 0.78
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 3.2
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 3.2
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical ... 28 4.2
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 27 9.7
Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 27 9.7
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 145 bits (352), Expect = 1e-35
Identities = 69/157 (43%), Positives = 106/157 (67%)
Frame = +2
Query: 20 SLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLK 199
+LL + ++ + P + D SWRVRYMVA+K +E+Q +G ++ T L ++ LLK
Sbjct: 235 TLLDKANKKKLIEPILIELFDDKSWRVRYMVAEKLIEIQNVLGEDMDTTHLVNMYTNLLK 294
Query: 200 DSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGL 379
D E EVR AA ++++F +NL + +++II +L K+LV D NQ VKS LA VIMGL
Sbjct: 295 DPEGEVRCAATQRLQEFALNLPEDKRQNIICNSLLNVAKELVTDGNQLVKSELAGVIMGL 354
Query: 380 SPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
+P++G++ T+ LLP+++ L D+ PEVRLNIIS+L+
Sbjct: 355 APLIGKEQTVSELLPIYMQLLNDQTPEVRLNIISSLD 391
Score = 44.0 bits (99), Expect = 6e-05
Identities = 33/159 (20%), Positives = 66/159 (41%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
V ++ + ++P + A D WRVR + L +G E L +
Sbjct: 393 VNEVIGAAQLSTSLLPAIVGLAEDGKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNW 452
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIM 373
L D +R A+ +K+ L + T I+P+++ L D N + +
Sbjct: 453 LTDHVFSIREASTLIMKE----LTQKFGGQWASTNIVPKMQKLQKDTNYLQRMTCLFCLN 508
Query: 374 GLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
LS + ++ ++ ++P+ ++D+ P VR N +L+
Sbjct: 509 TLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLK 547
Score = 38.7 bits (86), Expect = 0.002
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Frame = +2
Query: 11 VVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQA 190
++AS L E ++ ++P D + +R EL Q G + A T++ Q
Sbjct: 431 LLASQLGQEFFDEKLLPLCLNWLTDHVFSIREASTLIMKELTQKFGGQWASTNIVPKMQK 490
Query: 191 LLKDSEAEVRAAAAGKVKDFCMN-LDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASV 367
L KD+ R FC+N L +A + I+ I+P +KDLV D +V+ A
Sbjct: 491 LQKDTNYLQRMTCL-----FCLNTLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKS 545
Query: 368 IMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 466
+ + + + PL KD +VR
Sbjct: 546 LKRIGKNLTPSTLTSEVKPLLEKLGKDSDFDVR 578
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 128 ELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILP 307
EL + +G ++ D+ + A K E R A + + N+ K H + ++ P
Sbjct: 1015 ELVRKMGDKVIN-DILPVLDANQKSEEVAKRVGVAIALHEIIGNMSKEVTNHYLGAIVAP 1073
Query: 308 QIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDE 451
++ +CD ++ V+ A A L +VG + E + PL L QL E
Sbjct: 1074 -VRRAICDESELVREAAADTFTVLYHVVGNEALDEIICPL-LEQLTPE 1119
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 314 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 869 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 926
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 433
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 434 T 436
T
Sbjct: 303 T 303
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 314 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 995 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 1052
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 433
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 434 T 436
T
Sbjct: 303 T 303
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 314 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 869 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 926
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 433
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 434 T 436
T
Sbjct: 303 T 303
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 314 KDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
+ L D V+ +++ I ++ ++G++ T E LLP+F D+ P+VR I+ +L
Sbjct: 995 RKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHL 1052
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 433
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 434 T 436
T
Sbjct: 303 T 303
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
protein B0024.8 protein.
Length = 1185
Score = 31.5 bits (68), Expect = 0.34
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 368 IMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 466
I G S I+ QN + ++LP+ L +D+ P+VR
Sbjct: 853 IQGSSAILNNQNALSNVLPVLLQFSRDQSPQVR 885
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 30.3 bits (65), Expect = 0.78
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 248 FCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKS--ALASVIMG-LSPIVGRQNTIEHL 418
F + L K + H++ + + + A +H+ +LA V L+P Q TIE
Sbjct: 836 FALALFKICEPHVLQCKTIGTVHQCLSKAQEHIIDFKSLAQVAFNELNPFP--QKTIETK 893
Query: 419 LPLFLTQLKD 448
L+LTQLKD
Sbjct: 894 RQLYLTQLKD 903
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 433
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 434 T 436
T
Sbjct: 303 T 303
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFL 433
++ D H + LP+ ++ D HV+ + + L + G++ T L+P +
Sbjct: 243 ISYDAIHDRRWLFDNFLPRFSQMLKDPTMHVRKSALHIFGNLGNMFGQKFTEVFLVPHLI 302
Query: 434 T 436
T
Sbjct: 303 T 303
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 116 QRPCTAPSTKYLRHEPARSASHVAPYPRVPAEKPQ 12
+RP A Y+ PAR A ++ P P +PQ
Sbjct: 211 ERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQ 245
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 83 DTSWRVRYMVADKFVELQQAVGPELARTDL 172
D W + YMVA+ FVEL E+A +L
Sbjct: 295 DDIWSLMYMVAEFFVELPWTSNEEIALEEL 324
>AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical
protein W02G9.3 protein.
Length = 345
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 119 KFVELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTM 298
+F++ V LA DL+++ + L+K ++A GK+ + + + + +
Sbjct: 226 RFLQRVYPVEHTLA-VDLSKMNEVLMKVISDTLKADGTGKLPTYSVEFKARNNDSVAKNS 284
Query: 299 ILPQIKDLVC 328
+L + D VC
Sbjct: 285 VLQMVDDAVC 294
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 334 QPTRQVCPSLRHHGPEPHSGQTEHY*TSPAAVPHTT 441
QP ++ P HHG H G H+ S P TT
Sbjct: 303 QPLKETTPRRHHHG-HHHHGTHHHHHYSSTVRPTTT 337
>Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical
protein F55A11.2 protein.
Length = 413
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 164 TDLAQIFQAL--LKDSEAEVRAAAAGKVKDFCMNLDKAHQE 280
++L QIF L L + E+ V+D +N+D AH E
Sbjct: 339 SELGQIFSQLASLVSEQGEMITRIDSNVEDTALNIDMAHSE 379
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 334 QPTRQVCPSLRHHGPEPHSGQTEHY*TSPAAVPHTT 441
QP ++ P HHG H G H+ S P TT
Sbjct: 303 QPLKETTPRRHHHG-HHHHGTHHHHHYSSTVRPTTT 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,094,069
Number of Sequences: 27780
Number of extensions: 210765
Number of successful extensions: 697
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -