Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0064
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.0  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   5.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.3  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 305 PQIKDLVCDANQHVKSALASVIMGLSPIVG 394
           PQ+ D+   +N  +  AL +  +  SP++G
Sbjct: 24  PQLTDVCSASNGELFLALLNFFVATSPVIG 53


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 167 LYELALDQQLVAALRTYQRPCTAPSTKYLRHEPARSASHV 48
           LYELAL+Q +   LR         + K L+++  +   ++
Sbjct: 317 LYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYL 356


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 106 VPHPPRSISGT 74
           VP PPRS+ G+
Sbjct: 56  VPQPPRSLEGS 66


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 325 HQVLDLWQDHGHDDVFLMSFIQVHT 251
           HQ+  L Q H      L SF+Q H+
Sbjct: 72  HQMQQLLQQHILSPTQLQSFMQQHS 96


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 363 EARADLTCWLASHTKSLICGKIMVMMMC 280
           +A +DL     SH+ + + G + ++++C
Sbjct: 218 KAMSDLVICKLSHSNASVAGGMEMILLC 245


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 363 EARADLTCWLASHTKSLICGKIMVMMMC 280
           +A +DL     SH+ + + G + ++++C
Sbjct: 218 KAMSDLVICKLSHSNASVAGGMEMILLC 245


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 168 SVRASSGPTACCSS 127
           S  ASS PT+ CSS
Sbjct: 594 SSSASSAPTSVCSS 607


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  PEILRGGCGTWSLISS*SCNKLLVQ 152
           P +++ G G+W + +     KLL+Q
Sbjct: 144 PLLMQSGMGSWEVYTKGIGAKLLLQ 168


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 133 QLYELISDHVPHPPRS 86
           +L EL  D +PHPP S
Sbjct: 258 KLLELGWDVLPHPPYS 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,199
Number of Sequences: 438
Number of extensions: 2574
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)