Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0064
(490 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A... 179 8e-46
At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A... 176 8e-45
At1g25490.1 68414.m03165 serine/threonine protein phosphatase 2A... 175 1e-44
At5g16210.1 68418.m01894 HEAT repeat-containing protein contains... 36 0.019
At5g01400.1 68418.m00053 expressed protein contains low similari... 33 0.10
At1g64960.1 68414.m07363 expressed protein 30 0.73
At1g27910.1 68414.m03420 U-box domain-containing protein contain... 30 0.73
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 0.96
At3g13330.1 68416.m01678 expressed protein 28 2.9
At1g72390.1 68414.m08373 expressed protein 28 2.9
At5g09830.1 68418.m01137 BolA-like family protein contains Pfam ... 27 5.1
At4g10550.1 68417.m01727 subtilase family protein contains simil... 27 6.8
At2g17845.1 68415.m02067 short-chain dehydrogenase/reductase (SD... 27 6.8
At1g72040.1 68414.m08327 deoxynucleoside kinase family contains ... 27 6.8
At4g01360.1 68417.m00176 expressed protein 27 9.0
>At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A
(PP2A) 65 KDa regulatory subunit A identical to protein
phosphatase 2A 65 kDa regulatory subunit (pDF1)
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 179 bits (436), Expect = 8e-46
Identities = 89/162 (54%), Positives = 118/162 (72%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D QH++P + + D SWRVRYMVA++ EL +AVGPE RT+L +
Sbjct: 226 CAALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALAS 364
LL+D+EAEVR AAAGKV FC L+ I + ILP +K+L D++QHV+SALAS
Sbjct: 286 VRLLRDNEAEVRIAAAGKVTKFCRILN----PEIAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
VIMG++P++G+ TIEHLLP+FL+ LKDE P+VRLNIIS L+
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 60.9 bits (141), Expect = 5e-10
Identities = 37/150 (24%), Positives = 68/150 (45%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQ 400
AAA +K L + M I+PQ+ ++V + + + + + L+P++G +
Sbjct: 454 DAAANNLK----RLAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMTILRAVSLLAPVMGSE 509
Query: 401 NTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
T LLP+ +T KD P ++ N+ L+
Sbjct: 510 ITCSKLLPVVMTASKDRVPNIKFNVAKVLQ 539
Score = 53.6 bits (123), Expect = 7e-08
Identities = 36/158 (22%), Positives = 69/158 (43%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
V S + D+ H + V+ A + R F + P++ +T+L ++ L
Sbjct: 113 VGSQMRESDLVDHFISLVKRLAAGEWFTARVSACGVF-HIAYPSAPDMLKTELRSLYTQL 171
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIM 373
+D VR AAA + F ++ AH + +M+M +DL D V+
Sbjct: 172 CQDDMPMVRRAAATNLGKFAATVESAHLKTDVMSM----FEDLTQDDQDSVRLLAVEGCA 227
Query: 374 GLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
L ++ Q+ ++H+LP+ + +D+ VR + + L
Sbjct: 228 ALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQL 265
Score = 43.6 bits (98), Expect = 7e-05
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Frame = +2
Query: 26 LAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDS 205
+ PE ++P D VR A K + + + PE+A + + L DS
Sbjct: 272 VGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPEIAIQHILPCVKELSSDS 331
Query: 206 EAEVRAAAAGKVKDFCMNLDK-AHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLS 382
VR+A A + L K A EH ++ + L +KD D ++ S L V +
Sbjct: 332 SQHVRSALASVIMGMAPVLGKDATIEH-LLPIFLSLLKDEFPDVRLNIISKLDQV----N 386
Query: 383 PIVGRQNTIEHLLPLFLTQLKDECPEVRLNII 478
++G + LLP + +D VRL II
Sbjct: 387 QVIGIDLLSQSLLPAIVELAEDRHWRVRLAII 418
Score = 28.7 bits (61), Expect = 2.2
Identities = 23/118 (19%), Positives = 44/118 (37%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+A PE QH++P V + + R + L +G E+ + L +
Sbjct: 463 LAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPVVMTA 522
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASV 367
KD ++ A ++ +D++ E I ++ +D D AL S+
Sbjct: 523 SKDRVPNIKFNVAKVLQSLIPIVDQSVVEKTIRPGLVELSEDPDVDVRFFANQALQSI 580
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 284 IIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEV 463
I + +LP + D ++K +A V+ L PIV Q+ +E + L +L ++ P+V
Sbjct: 510 ITCSKLLPVVMTASKDRVPNIKFNVAKVLQSLIPIVD-QSVVEKTIRPGLVELSED-PDV 567
Query: 464 RLNIISN 484
+ +N
Sbjct: 568 DVRFFAN 574
>At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A
(PP2A) 65 kDa regulatory subunit, putative similar to
protein phosphatase 2A 65 kDa regulatory subunit
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 176 bits (428), Expect = 8e-45
Identities = 88/162 (54%), Positives = 116/162 (71%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D H++P + + D SWRVRYMVA++ EL +AVGPE RTDL +
Sbjct: 226 CAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALAS 364
LL D+EAEVR AAAGKV FC L+ + + ILP +K+L D++QHV+SALAS
Sbjct: 286 ARLLCDNEAEVRIAAAGKVTKFCRILN----PELAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
VIMG++P++G+ TIEHLLP+FL+ LKDE P+VRLNIIS L+
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/150 (23%), Positives = 67/150 (44%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDEKLGALCMQWLQDKVHSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQ 400
AAA +K L + M I+PQ+ +++ + + + + + L+P++G +
Sbjct: 454 EAAANNLK----RLAEEFGPEWAMQHIVPQVLEMINNPHYLYRMTILRAVSLLAPVMGSE 509
Query: 401 NTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
T LLP +T KD P ++ N+ ++
Sbjct: 510 ITCSKLLPAVITASKDRVPNIKFNVAKMMQ 539
Score = 53.2 bits (122), Expect = 9e-08
Identities = 36/158 (22%), Positives = 68/158 (43%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+ + + D+ +H P + R W + A + P++ +T+L I+ L
Sbjct: 113 IGAQMRESDLVEHFTPLAK-RLSAGEWFTARVSACGIFHIAYPSAPDVLKTELRSIYGQL 171
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIM 373
+D VR AAA + F ++ AH + IM+M +DL D V+
Sbjct: 172 CQDDMPMVRRAAATNLGKFAATIESAHLKTDIMSM----FEDLTQDDQDSVRLLAVEGCA 227
Query: 374 GLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
L ++ Q+ + H+LP+ + +D+ VR + + L
Sbjct: 228 ALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQL 265
Score = 44.4 bits (100), Expect = 4e-05
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Frame = +2
Query: 26 LAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDS 205
+ PE ++P D VR A K + + + PELA + + L DS
Sbjct: 272 VGPEPTRTDLVPAYARLLCDNEAEVRIAAAGKVTKFCRILNPELAIQHILPCVKELSSDS 331
Query: 206 EAEVRAAAAGKVKDFCMNLDK-AHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLS 382
VR+A A + L K A EH ++ + L +KD D ++ S L V +
Sbjct: 332 SQHVRSALASVIMGMAPVLGKDATIEH-LLPIFLSLLKDEFPDVRLNIISKLDQV----N 386
Query: 383 PIVGRQNTIEHLLPLFLTQLKDECPEVRLNII 478
++G + LLP + +D VRL II
Sbjct: 387 QVIGIDLLSQSLLPAIVELAEDRHWRVRLAII 418
Score = 30.3 bits (65), Expect = 0.73
Identities = 24/118 (20%), Positives = 45/118 (38%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+A PE QH++P V + + R + L +G E+ + L
Sbjct: 463 LAEEFGPEWAMQHIVPQVLEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITA 522
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASV 367
KD ++ A ++ +D+A E++I ++ +D D AL S+
Sbjct: 523 SKDRVPNIKFNVAKMMQSLIPIVDQAVVENMIRPCLVELSEDPDVDVRYFANQALQSI 580
>At1g25490.1 68414.m03165 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit A (RCN1) identical to
phosphoprotein phosphatase 2A, regulatory subunit A
GI:1262171 from [Arabidopsis thaliana]
Length = 588
Score = 175 bits (427), Expect = 1e-44
Identities = 87/162 (53%), Positives = 117/162 (72%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D ++P + + D SWRVRYMVA++ EL +AVGP+ RTDL +
Sbjct: 226 CAALGKLLEPQDCVARILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTRTDLVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALAS 364
LL+D+EAEVR AAAGKV FC L+ + + ILP +K+L D++QHV+SALAS
Sbjct: 286 VRLLRDNEAEVRIAAAGKVTKFCRLLNP----ELAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
VIMG++PI+G+ +TIEHLLP+FL+ LKDE P+VRLNIIS L+
Sbjct: 342 VIMGMAPILGKDSTIEHLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 54.8 bits (126), Expect = 3e-08
Identities = 35/150 (23%), Positives = 66/150 (44%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYVPLLASQLGIGFFDDKLGALCMQWLQDKVYSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQ 400
AAA +K L + M ++PQ+ D+V + + + + I ++P++G +
Sbjct: 454 EAAANNLK----RLAEEFGPEWAMQHLVPQVLDMVNNPHYLHRMMVLRAISLMAPVMGSE 509
Query: 401 NTIEHLLPLFLTQLKDECPEVRLNIISNLE 490
T LP+ + KD P ++ N+ L+
Sbjct: 510 ITCSKFLPVVVEASKDRVPNIKFNVAKLLQ 539
Score = 43.2 bits (97), Expect = 1e-04
Identities = 36/158 (22%), Positives = 63/158 (39%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+ S + D+ + +P V+ AG + R F Q ++ +T+L + L
Sbjct: 113 IGSQMKENDLVESFVPLVKRLAGGEWFAARVSACGIFHVAYQGC-TDVLKTELRATYSQL 171
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIM 373
KD VR AAA + F ++ IMTM DL D V+
Sbjct: 172 CKDDMPMVRRAAASNLGKFATTVESTFLIAEIMTM----FDDLTKDDQDSVRLLAVEGCA 227
Query: 374 GLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
L ++ Q+ + +LP+ + +D+ VR + + L
Sbjct: 228 ALGKLLEPQDCVARILPVIVNFSQDKSWRVRYMVANQL 265
Score = 41.9 bits (94), Expect = 2e-04
Identities = 37/151 (24%), Positives = 60/151 (39%)
Frame = +2
Query: 26 LAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDS 205
+ P+ ++P D VR A K + + + PELA + + L DS
Sbjct: 272 VGPDCTRTDLVPAYVRLLRDNEAEVRIAAAGKVTKFCRLLNPELAIQHILPCVKELSSDS 331
Query: 206 EAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSP 385
VR+A A + L K ++ + L +KD D ++ S L V +
Sbjct: 332 SQHVRSALASVIMGMAPILGKDSTIEHLLPIFLSLLKDEFPDVRLNIISKLDQV----NQ 387
Query: 386 IVGRQNTIEHLLPLFLTQLKDECPEVRLNII 478
++G + LLP + +D VRL II
Sbjct: 388 VIGIDLLSQSLLPAIVELAEDRHWRVRLAII 418
>At5g16210.1 68418.m01894 HEAT repeat-containing protein contains
Pfam profile PF02985: HEAT repeat
Length = 1180
Score = 35.5 bits (78), Expect = 0.019
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Frame = +2
Query: 2 ACAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQI 181
AC ++ + E ++P + T R +VA EL + V PE+ + + I
Sbjct: 516 ACVSLSRNVGEMRTETELLPQCWEQINHTYEERRLLVAQSCGELAEYVRPEIRDSLILSI 575
Query: 182 FQALLKDSEAEVRAAAAGKVK---DFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKS 352
Q L++DS VR AAA + N DK + +M ++ LV + +K
Sbjct: 576 VQQLIEDSATVVREAAAHNLALLLPLFPNTDKYFKVEEMMFQLICDPSGLVVETT--LKE 633
Query: 353 ALASVI 370
L +VI
Sbjct: 634 LLPAVI 639
>At5g01400.1 68418.m00053 expressed protein contains low similarity
to symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 33.1 bits (72), Expect = 0.10
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 254 MNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVI--MGLSPIVGRQNTIEHLLPL 427
M D + + T +LP + DL+ D V+ +A ++ +GL + I ++PL
Sbjct: 32 MRRDLQKDDSVFPTELLPHLFDLLSDQFGAVRKFVAEILGEIGLKYV----ELIPEIVPL 87
Query: 428 FLTQLKDECPEVRLNIIS 481
+ L+DE P V +I+
Sbjct: 88 LIKSLEDETPAVARQVIA 105
>At1g64960.1 68414.m07363 expressed protein
Length = 1168
Score = 30.3 bits (65), Expect = 0.73
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 LAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVK 349
L +IF + +S +EVR + + N Q H I+ +ILP++ L+ D+ V+
Sbjct: 434 LTKIFDDMSHESCSEVRLSTVNGITYLLAN----PQSHGILKVILPRLGHLMLDSVTSVR 489
Query: 350 SALASVIMGLSPIVGRQ-NTIEHLLPLFLTQLKDE 451
A+ +++ + + Q NT+ L L D+
Sbjct: 490 VAMVDLLLLIRDVRAFQFNTVVSLDVLLSVLASDQ 524
>At1g27910.1 68414.m03420 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 768
Score = 30.3 bits (65), Expect = 0.73
Identities = 20/112 (17%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Frame = +2
Query: 170 LAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVK 349
L Q + L ++ A + A + + ++ ++ ++E ++ + I+P +++++C N H
Sbjct: 469 LLQFLGSALNENNASAQKVGAMALFNLAVDNNR-NKELMLASGIIPLLEEMLC--NPHSH 525
Query: 350 SALASVIMGLS------PIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
++ ++ + LS P++G + ++ L T+ + +C L+ + +L
Sbjct: 526 GSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHL 577
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40
repeat family protein contains Pfam PF00400: WD domain,
G-beta repeat; contains Pfam PF00069: Protein kinase
domain; contains PF02985: HEAT repeat; similar to
adaptor protein (GI:1817584) [Homo sapiens]; similar to
VPS15 protein (GI:6103009) [Pichia pastoris]
Length = 1494
Score = 29.9 bits (64), Expect = 0.96
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 161 RTDLAQIFQALLKDSEA--EVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDA 334
R +A++ Q L+ + VR A + + C + Q + + ILP + D
Sbjct: 609 RKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQ-RQSNDFLLPILPAFLN---DR 664
Query: 335 NQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNL 487
++ ++S I+ + VG+++ E+LLP L D+ V +N + L
Sbjct: 665 DEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALECL 715
>At3g13330.1 68416.m01678 expressed protein
Length = 1711
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 32 PEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF---QALLKD 202
PE Q V+ + + A D++WR+R L D +I+ + LL D
Sbjct: 1511 PESHLQKVIGVILSSADDSNWRIRSSTLTYLRTFMYRHTFILTHEDKQKIWKTVEKLLVD 1570
Query: 203 SEAEVRAAAA 232
S+ EVR AA
Sbjct: 1571 SQVEVREHAA 1580
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 151 WTNSLLQLYELISDHVPHPPRSISGTSPH 65
W N+LLQ +++ + +P SI SPH
Sbjct: 174 WKNTLLQHQDMLGRSIQYPNTSIQRFSPH 202
>At5g09830.1 68418.m01137 BolA-like family protein contains Pfam
profile: PF01722 BolA-like protein
Length = 93
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 259 VHTEVLDLPSSCGSNLSLRVLEQCLE 182
+H EV+D+ CGS+ + V+ + E
Sbjct: 18 IHLEVIDISGGCGSSFEVEVVSEQFE 43
>At4g10550.1 68417.m01727 subtilase family protein contains
similarity to subtilisin-like protease AIR3 GI:4218991
from [Arabidopsis thaliana]
Length = 778
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 69 GLVPEILRGGCGTWSLISS*SCNKLLV 149
G VP +GGC T +S +CNK L+
Sbjct: 163 GPVPSHWKGGCETGENFNSSNCNKKLI 189
>At2g17845.1 68415.m02067 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 312
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSA 355
LKD V A++G ++ C++L KA + I + ++K L + N+ SA
Sbjct: 47 LKDKVVLVTGASSGIGREVCLDLAKAGCKIIAAARRVDRLKSLCSEINRFEYSA 100
>At1g72040.1 68414.m08327 deoxynucleoside kinase family contains
Pfam profile: PF01712 deoxynucleoside kinase
Length = 580
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 177 CARSVRASSGPTACCSS--TNLSATMYRTLHEVSPARAR--TVGITCCSISSGASREA 16
C S A TA SS SA + RT+H+ +PA R T G C S + A
Sbjct: 51 CFFSTSAMPTTTASVSSGGVGFSAYLQRTVHKPAPASVRFSTAGYRTCRCSIDGTNRA 108
>At4g01360.1 68417.m00176 expressed protein
Length = 348
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 122 FVELQQAVGPELARTDLAQIFQALLKDSEA 211
F+ELQ + PE+ T L+ F ++KD EA
Sbjct: 234 FMELQNTINPEIKNTFLSDGF-TVIKDLEA 262
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,573,723
Number of Sequences: 28952
Number of extensions: 197251
Number of successful extensions: 662
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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