Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0062
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens ...    33   0.93 
AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens ...    33   1.2  
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.     33   1.2  
BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    32   2.2  
BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    32   2.2  
BC065279-1|AAH65279.1|  375|Homo sapiens IWS1 protein protein.         32   2.2  
U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.                30   8.7  
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.        30   8.7  
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.             30   8.7  

>AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14655 fis, clone NT2RP2002292. ).
          Length = 819

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 177 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 353
           +PP+ +              + +  EE  R+     ENEE+ RP + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPRPRISDSESEDPPRHQAS 261

Query: 354 ETQNPE 371
           +++N E
Sbjct: 262 DSENEE 267


>AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42547 fis, clone BRACE3004880. ).
          Length = 256

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = -3

Query: 242 LISSTITLTGMSTTSFLFARRLLSMSLIVLAWS---MSSCSLDKFSTTFKGLSSASGTLS 72
           L S T++  G+S+T+ LFA RL S+++   + S   +S+C L + + +  GLSS + +  
Sbjct: 118 LSSMTLSACGLSSTT-LFACRLSSVTVSTCSLSSVTLSACGLSRVTLSACGLSSMTPSAC 176

Query: 71  GMEAARAASTNVVS 30
           G+     ++ ++ S
Sbjct: 177 GLSRVTLSACHLSS 190


>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
          Length = 1967

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/87 (24%), Positives = 38/87 (43%)
 Frame = +3

Query: 291  EEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDG 470
            EE + P    +  G  + +E +    E  ++ E   SSVKN++   E+    G + +S+ 
Sbjct: 1414 EEPENPAAKEKCEGKEEEEETDGSGKESKQECEAEASSVKNELKGVEVGADTGSKSISEK 1473

Query: 471  IGKWYARTEQINELQASLQHFQENFGA 551
             G      E++ +   S +  Q   GA
Sbjct: 1474 -GSEEDEEEKLEDDDKSEESSQPEAGA 1499


>BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 177 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 353
           +PP+ +              + +  EE  R+     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 354 ETQNPE 371
           +++N E
Sbjct: 262 DSENEE 267


>BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 177 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 353
           +PP+ +              + +  EE  R+     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 354 ETQNPE 371
           +++N E
Sbjct: 262 DSENEE 267


>BC065279-1|AAH65279.1|  375|Homo sapiens IWS1 protein protein.
          Length = 375

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 177 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 353
           +PP+ +              + +  EE  R+     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 354 ETQNPE 371
           +++N E
Sbjct: 262 DSENEE 267


>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
          Length = 3321

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
 Frame = +3

Query: 402  SVKNDINTAEIALR-QGFQEVSDGIGKWYARTEQINELQASLQHFQEN-------FGAQI 557
            ++K D+  ++ A+  +  +E +  +   Y R+ +I EL+A++++ QEN          +I
Sbjct: 1669 NLKLDMQNSQTAVSLRELEEENTSLKVIYTRSSEIEELKATIENLQENQKRLQKEKAEEI 1728

Query: 558  QKLNETLHFIKPADTIAAPSVEETQN 635
            ++L+E +  ++   ++  P V E  +
Sbjct: 1729 EQLHEVIEKLQHELSLMGPVVHEVSD 1754


>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
          Length = 3336

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
 Frame = +3

Query: 402  SVKNDINTAEIALR-QGFQEVSDGIGKWYARTEQINELQASLQHFQEN-------FGAQI 557
            ++K D+  ++ A+  +  +E +  +   Y R+ +I EL+A++++ QEN          +I
Sbjct: 1680 NLKLDMQNSQTAVSLRELEEENTSLKVIYTRSSEIEELKATIENLQENQKRLQKEKAEEI 1739

Query: 558  QKLNETLHFIKPADTIAAPSVEETQN 635
            ++L+E +  ++   ++  P V E  +
Sbjct: 1740 EQLHEVIEKLQHELSLMGPVVHEVSD 1765


>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
          Length = 3284

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
 Frame = +3

Query: 402  SVKNDINTAEIALR-QGFQEVSDGIGKWYARTEQINELQASLQHFQEN-------FGAQI 557
            ++K D+  ++ A+  +  +E +  +   Y R+ +I EL+A++++ QEN          +I
Sbjct: 1707 NLKLDMQNSQTAVSLRELEEENTSLKVIYTRSSEIEELKATIENLQENQKRLQKEKAEEI 1766

Query: 558  QKLNETLHFIKPADTIAAPSVEETQN 635
            ++L+E +  ++   ++  P V E  +
Sbjct: 1767 EQLHEVIEKLQHELSLMGPVVHEVSD 1792


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,674,884
Number of Sequences: 237096
Number of extensions: 1638474
Number of successful extensions: 5482
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5472
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)