Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0060
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95821-1|AAC24457.1|  718|Drosophila melanogaster putative trans...    30   2.6  
BT023232-1|AAY55648.1|  718|Drosophila melanogaster IP02808p pro...    30   2.6  
BT023220-1|AAY55636.1|  718|Drosophila melanogaster IP02908p pro...    30   2.6  
BT023200-1|AAY55616.1|  718|Drosophila melanogaster IP03108p pro...    30   2.6  
AE014297-3294|AAF56110.2|  718|Drosophila melanogaster CG4568-PA...    30   2.6  
AE014296-566|AAF47718.1|  680|Drosophila melanogaster CG11537-PB...    29   8.0  
AE014296-565|AAF47717.1|  680|Drosophila melanogaster CG11537-PA...    29   8.0  

>U95821-1|AAC24457.1|  718|Drosophila melanogaster putative
           transmembrane GTPase protein.
          Length = 718

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 180 HLPLHA-PFVQQRWENGNTVCSPL 248
           +LPLHA PF  Q+ +NG+  CSPL
Sbjct: 533 NLPLHASPFRIQKLQNGHKKCSPL 556


>BT023232-1|AAY55648.1|  718|Drosophila melanogaster IP02808p
           protein.
          Length = 718

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 180 HLPLHA-PFVQQRWENGNTVCSPL 248
           +LPLHA PF  Q+ +NG+  CSPL
Sbjct: 533 NLPLHASPFRIQKLQNGHKKCSPL 556


>BT023220-1|AAY55636.1|  718|Drosophila melanogaster IP02908p
           protein.
          Length = 718

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 180 HLPLHA-PFVQQRWENGNTVCSPL 248
           +LPLHA PF  Q+ +NG+  CSPL
Sbjct: 533 NLPLHASPFRIQKLQNGHKKCSPL 556


>BT023200-1|AAY55616.1|  718|Drosophila melanogaster IP03108p
           protein.
          Length = 718

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 180 HLPLHA-PFVQQRWENGNTVCSPL 248
           +LPLHA PF  Q+ +NG+  CSPL
Sbjct: 533 NLPLHASPFRIQKLQNGHKKCSPL 556


>AE014297-3294|AAF56110.2|  718|Drosophila melanogaster CG4568-PA
           protein.
          Length = 718

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 180 HLPLHA-PFVQQRWENGNTVCSPL 248
           +LPLHA PF  Q+ +NG+  CSPL
Sbjct: 533 NLPLHASPFRIQKLQNGHKKCSPL 556


>AE014296-566|AAF47718.1|  680|Drosophila melanogaster CG11537-PB,
           isoform B protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 192 HAPFVQQRWENGNTVCSPLCSRHPCADN--AAPRYRGARLSPTAA 320
           H+P   ++ E  ++  S  CS+ P AD+     RY  A   P+AA
Sbjct: 106 HSPLKDKQAEQADSSSSSSCSQQPDADDVPTTSRYAAAAAHPSAA 150


>AE014296-565|AAF47717.1|  680|Drosophila melanogaster CG11537-PA,
           isoform A protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 192 HAPFVQQRWENGNTVCSPLCSRHPCADN--AAPRYRGARLSPTAA 320
           H+P   ++ E  ++  S  CS+ P AD+     RY  A   P+AA
Sbjct: 106 HSPLKDKQAEQADSSSSSSCSQQPDADDVPTTSRYAAAAAHPSAA 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,661,729
Number of Sequences: 53049
Number of extensions: 804413
Number of successful extensions: 2029
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)