Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0060
(696 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.91
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.91
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.91
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.91
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 3.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 4.8
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 21 8.5
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.6 bits (51), Expect = 0.91
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 TLKPHRRDKA-RPRSVGGEFILRFILDWVIRNTNYKRLNY 415
T K RD+ R RS + I + + + N NYK+L Y
Sbjct: 284 TSKERSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQY 323
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 0.91
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 TLKPHRRDKA-RPRSVGGEFILRFILDWVIRNTNYKRLNY 415
T K RD+ R RS + I + + + N NYK+L Y
Sbjct: 295 TSKERSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQY 334
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 0.91
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 TLKPHRRDKA-RPRSVGGEFILRFILDWVIRNTNYKRLNY 415
T K RD+ R RS + I + + + N NYK+L Y
Sbjct: 295 TSKERSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQY 334
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.6 bits (51), Expect = 0.91
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 TLKPHRRDKA-RPRSVGGEFILRFILDWVIRNTNYKRLNY 415
T K RD+ R RS + I + + + N NYK+L Y
Sbjct: 284 TSKERSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQY 323
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 299 TLKPHRRDKARPRSVGGEFILRFILDWVIRNTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
T K RD+ I+ + + I N N + NY + Y ++ + IP PV
Sbjct: 62 TSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNCKKLYYNINYIEQIPIPV 121
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 194 RTLCPAKVGKREHGVQSSLFTAPLCR--QRCSTVSGCTLK 307
+ + +KVG EH + +++ P R + + V+G TL+
Sbjct: 470 KCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLR 509
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
N NYK N + Y + N+ IP PV
Sbjct: 308 NYNYKNYNNNYNSKKLYYNIINIEQIPVPV 337
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
N NYK N + Y + N+ IP PV
Sbjct: 319 NYNYKNYNNNYNSKKLYYNIINIEQIPVPV 348
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 106 NTNYKKLQY-------YNII-NIEQIPVPV 127
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 NTNYKRLNYLVSQVVTYIIVHNVVLIPFPV 478
NTNYK+L Y Y I+ N+ IP PV
Sbjct: 102 NTNYKKLQY-------YNII-NIEQIPVPV 123
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 580 NSHSKEYIRKNLNPTNNIF*VRYTHNCSE 666
N+++ +Y N N NN + Y +NC +
Sbjct: 325 NNNNYKYNYNNNNYNNNNYNNNYNNNCKK 353
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 4.8
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 157 SRRLQKGAISRFTHPLSSKGGKTGTRCAVLFVHGTPVQTTLLHGIGV 297
S + Q G S P S+ G T T +HG Q HG+GV
Sbjct: 162 SEKEQLGLASVKAEPGST--GTTTTSTGTRLLHGILSQHPQQHGLGV 206
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 519 FGHCLVCLSNNYDKGEN 569
F CL+ N YD G N
Sbjct: 62 FSECLIKKFNGYDDGGN 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,494
Number of Sequences: 438
Number of extensions: 5434
Number of successful extensions: 29
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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