Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0059
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          39   2e-04
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   8.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +3

Query: 438 LRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHLAACRGYVDVVRILLRHG 596
           L  A S N+  +V+ LL AGA  +  D    +PLH A      D+VR+LL  G
Sbjct: 788 LHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQG 840



 Score = 33.1 bits (72), Expect = 0.008
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 516 DEHKRSPLHLAACRGYVDVVRILLRHGANPNNKDTLGNTPLHLAACTN 659
           ++   + LHLA       +V+ LL  GA  +  D  GNTPLH A   N
Sbjct: 781 NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVEN 828


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 228 SDNPVFDHSKCVLEFNLPAIPITQSGQPMPV 320
           S +PV D S+ V    +P++P+  S +P PV
Sbjct: 350 SISPVSDRSESVSP--VPSLPVRSSPEPSPV 378


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -3

Query: 323 LYWHWLTRLGYRNCWKIKF-QNTFRMI 246
           L+ HWLT      CW+    Q  +R++
Sbjct: 386 LFAHWLTTRPPTGCWETAIGQELYRLL 412


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,732
Number of Sequences: 2352
Number of extensions: 16532
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)