Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0058
(423 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 175 2e-43
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 153 1e-36
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 150 1e-35
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 146 2e-34
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 136 1e-31
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 132 3e-30
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 127 8e-29
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 125 3e-28
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 124 8e-28
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 123 2e-27
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 113 2e-24
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 111 4e-24
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 102 3e-21
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 93 2e-18
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 89 3e-17
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 72 4e-12
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-08
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 1e-06
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 46 3e-04
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 7e-04
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 43 0.003
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 42 0.007
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.007
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 40 0.016
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.016
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.021
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.028
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.048
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 35 0.60
UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497 ... 34 1.4
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 34 1.4
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 2.4
UniRef50_Q47VA1 Cluster: Voltage-gated chloride channel; n=1; Co... 32 4.2
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 32 4.2
UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 31 7.4
UniRef50_Q6RKJ4 Cluster: Polyketide synthase; n=4; Sclerotiniace... 31 7.4
UniRef50_A6T0S2 Cluster: Mechanosensitive ion channel protein; n... 31 9.7
UniRef50_A0TLH8 Cluster: Putative uncharacterized protein; n=3; ... 31 9.7
UniRef50_Q4WCW8 Cluster: C2H2 finger domain protein, putative; n... 31 9.7
UniRef50_Q5YYA4 Cluster: Tyrosyl-tRNA synthetase; n=48; cellular... 31 9.7
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 175 bits (427), Expect = 2e-43
Identities = 84/135 (62%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +1
Query: 19 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 198
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 199 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 378
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 379 LFP-KGKKVLKGDAN 420
LFP K KGD++
Sbjct: 126 LFPRKPSAPKKGDSS 140
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 153 bits (372), Expect = 1e-36
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
Frame = +1
Query: 7 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 186
M + NNMIPNGHFHK WQ+ VK WFNQP ++ RRK R LRP+V C
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALRAKKSRQLAPKPTEL-LRPLVHC 59
Query: 187 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 366
P+ RY +KVRAGRGFT +E++ AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY+
Sbjct: 60 PSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYK 119
Query: 367 ARLILFPKGK-KVLKGD 414
+RLI P K KVLK D
Sbjct: 120 SRLIFLPDSKNKVLKID 136
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 150 bits (364), Expect = 1e-35
Identities = 69/126 (54%), Positives = 90/126 (71%)
Frame = +1
Query: 13 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 192
K NN++ N HF KDWQR VK WF+QP + RR+ R LRP VRCPT
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPT 62
Query: 193 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 372
+RY+TK+R+GRGFT+ E++AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+AR
Sbjct: 63 LRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQAR 122
Query: 373 LILFPK 390
L++ PK
Sbjct: 123 LVVIPK 128
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 146 bits (353), Expect = 2e-34
Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
Frame = +1
Query: 13 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 192
K NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ R LRP+V T
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61
Query: 193 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 372
++Y+ KVRAG+GFTL E++ AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+
Sbjct: 62 LKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAK 121
Query: 373 LILFP-KGKKVLKGDA 417
L++FP + ++V GD+
Sbjct: 122 LVVFPRRSRQVKAGDS 137
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 136 bits (330), Expect = 1e-31
Identities = 74/146 (50%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Frame = +1
Query: 7 MGKGNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXL 168
M KGNN IP+ H K W VK +FNQPA++ RR++ R+ L
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-L 70
Query: 169 RPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQ 348
RP V CPTVRY+ K R GRGF+L E++AAG+ P +ARTIGI VD RR+NKS E + INVQ
Sbjct: 71 RPQVNCPTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQ 130
Query: 349 RIKEYRARLILFP-KGKKVLKGDANE 423
R+K Y ++L+LFP KK KGDA E
Sbjct: 131 RLKTYMSKLVLFPLNRKKPQKGDATE 156
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 132 bits (319), Expect = 3e-30
Identities = 63/116 (54%), Positives = 82/116 (70%)
Frame = +1
Query: 43 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 222
FHKDWQR V+ F+QP R++RR++ R+ LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89
Query: 223 RGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 390
RGFTL E++ AG+ ART+GIAVD RR N S ESL NV R+K+Y+ARLILFP+
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPR 145
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 127 bits (307), Expect = 8e-29
Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Frame = +1
Query: 19 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 198
NN+IPN H+HK+++R++KTW+NQP R+ R+ R LRPIV PT R
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQR 62
Query: 199 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 378
Y+ K R GRGFTL E+ A G+N A +IGIAVD RR + S E+ QINV R+K+Y ++
Sbjct: 63 YNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIV 122
Query: 379 LFP-KGKKVLKGDA 417
L P KGKK KG A
Sbjct: 123 LQPRKGKKTKKGFA 136
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 125 bits (302), Expect = 3e-28
Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 5/142 (3%)
Frame = +1
Query: 13 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 192
K N +PN H K W RFVKT++NQPA + RR+Q R LRP+VR T
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60
Query: 193 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 372
++Y++ + GRGF+L E++ AGLN FART+GI+VD RRRN + E L NV+R+K Y ++
Sbjct: 61 IKYNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSK 120
Query: 373 LILFPK--GKK---VLKGDANE 423
L+L+P+ GK V+K NE
Sbjct: 121 LVLYPRVAGKPKNGVVKDSTNE 142
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 124 bits (299), Expect = 8e-28
Identities = 58/122 (47%), Positives = 82/122 (67%)
Frame = +1
Query: 34 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 213
N HF K WQ V+ F+Q ++ R+Q+R+ LRP+VR PTV+Y+ KV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKV 69
Query: 214 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKG 393
RAGRGFTL E++A G+ P +ARTIGI+VD RR+NKS E+ NV R++EY+++L++F K
Sbjct: 70 RAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKK 129
Query: 394 KK 399
K
Sbjct: 130 TK 131
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 123 bits (296), Expect = 2e-27
Identities = 63/134 (47%), Positives = 80/134 (59%)
Frame = +1
Query: 1 VKMGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIV 180
++M NN IPN H K W VKT+F+ PAR RR+ R LRPIV
Sbjct: 20 LEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIV 79
Query: 181 RCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKE 360
RCPTVRY+ K R GRGFT +E+ AAG +P AR GIAVD RR + ++ NV+R++
Sbjct: 80 RCPTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQA 139
Query: 361 YRARLILFPKGKKV 402
Y+ARLI KG+ V
Sbjct: 140 YKARLIKVKKGETV 153
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 113 bits (271), Expect = 2e-24
Identities = 61/137 (44%), Positives = 82/137 (59%)
Frame = +1
Query: 7 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 186
M K NNM+ + H K RFVK NQ ++ RR+ R LRP+V
Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHM 59
Query: 187 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 366
P+ RY+ K+R GRGFTL+E++ AGL AR++G+AVD RR NK ESL +NV R+K Y
Sbjct: 60 PSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYL 119
Query: 367 ARLILFPKGKKVLKGDA 417
++L+LFP+ K KG A
Sbjct: 120 SKLVLFPRKKHAKKGFA 136
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 111 bits (268), Expect = 4e-24
Identities = 55/126 (43%), Positives = 77/126 (61%)
Frame = +1
Query: 19 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 198
NN++PN H HK WQR+V+ FN+ +R +R+ R L P+V CPT R
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQR 63
Query: 199 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 378
Y+ K R G+GFTL EI+A L P AR+IGI VD RR+N+ ESL+ N +R+++Y L+
Sbjct: 64 YNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLV 123
Query: 379 LFPKGK 396
+ P K
Sbjct: 124 MIPLKK 129
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 102 bits (245), Expect = 3e-21
Identities = 54/121 (44%), Positives = 70/121 (57%)
Frame = +1
Query: 43 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 222
F KDW+ V TW QP R+ RR Q R+ L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 223 RGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 402
RGF+L+E+RAA ++ ARTIGIAVDPRR+ S E L N QR+ EY RL L K+
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKI 130
Query: 403 L 405
+
Sbjct: 131 V 131
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 93.1 bits (221), Expect = 2e-18
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +1
Query: 166 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 345
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K E +
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKN 72
Query: 346 QRIKEYRARLILFPKGKK 399
+R+ E + I++PK +K
Sbjct: 73 ERVTETNQKDIIYPKREK 90
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 89.0 bits (211), Expect = 3e-17
Identities = 49/135 (36%), Positives = 70/135 (51%)
Frame = +1
Query: 13 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 192
KGN+ +PN HF K + + P + R + LRPIVRCPT
Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59
Query: 193 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 372
++Y+ R GRGFT E AGL+ AR +GIAVD RRR+ + E+ NV+RIK Y +
Sbjct: 60 IKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNVERIKTYLGK 119
Query: 373 LILFPKGKKVLKGDA 417
+ ++ K+ + A
Sbjct: 120 ITIYESVKEARESGA 134
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 72.1 bits (169), Expect = 4e-12
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +1
Query: 37 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 213
GHF K W+ V T FNQP + RRK + L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 214 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSV 324
+ GRGF+++EI+ + + A + GI++D RR+ ++
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 59.7 bits (138), Expect = 2e-08
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 28 IPNGHFHKDWQRFVKTWFNQPARRYRRK 111
+PN HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 54.0 bits (124), Expect = 1e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1
Query: 19 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 108
N MI HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 46.0 bits (104), Expect = 3e-04
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +1
Query: 172 PIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQI 339
PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ +D RRR +
Sbjct: 10 PIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EW 65
Query: 340 NVQRIKEYRARL 375
NVQ +++Y ++
Sbjct: 66 NVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 7e-04
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +1
Query: 211 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 360
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 42.7 bits (96), Expect = 0.003
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = -2
Query: 311 RLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 144
++R S VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 388 KIRVSLTTLAVRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 41.5 bits (93), Expect = 0.007
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 169 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 336
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.007
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +1
Query: 208 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 378
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 166 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 336
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + +D RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 337 INVQRIKE 360
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.016
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 214 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 375
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.021
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1
Query: 166 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 261
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 39.5 bits (88), Expect = 0.028
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +1
Query: 211 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---KSVESLQINVQRIKEY 363
++ GRGF+ E++A GL AR +GI VD RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.048
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 172 PIVRCPTVRYHTKVRAGRGFTLREIR 249
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 35.1 bits (77), Expect = 0.60
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 166 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 345
L P++R + K+R GRGF+ E+ A GL+ A +GI +D RR K+V + NV
Sbjct: 29 LTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNV 83
Query: 346 QRIKEY 363
+ +K++
Sbjct: 84 EALKKW 89
>UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495497 protein -
Strongylocentrotus purpuratus
Length = 802
Score = 33.9 bits (74), Expect = 1.4
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 258 SCGPNFTKSESSTGAYFSMVPNSWASHYRT*RPS-CRTWSYGLSFLYSILLSAVSSSWLV 82
SC P+ T S ST + P +H+ T P C WS+ SF Y A L
Sbjct: 367 SCPPSSTSS--STSSKQETPPCPVDNHFETGPPEKCHKWSFIFSFTYLAFFRAAGYFGLE 424
Query: 81 KP-SFNKSLPILVEMSI 34
KP SF+ + +L+ + +
Sbjct: 425 KPTSFSNVVQLLLTLKL 441
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 33.9 bits (74), Expect = 1.4
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 211 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 378
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMV 207
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 2.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 351 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 223
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
>UniRef50_Q47VA1 Cluster: Voltage-gated chloride channel; n=1;
Colwellia psychrerythraea 34H|Rep: Voltage-gated
chloride channel - Colwellia psychrerythraea (strain 34H
/ ATCC BAA-681) (Vibriopsychroerythus)
Length = 574
Score = 32.3 bits (70), Expect = 4.2
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = -1
Query: 123 YSILLSAVSSSWLVKPSFNKSLPILVEMSIRYHIIP 16
+S++L A+ ++ +FNK L ++++ S++YHI+P
Sbjct: 233 FSLILLAIVLG-ILAAAFNKYLVVIIKKSVKYHIVP 267
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 32.3 bits (70), Expect = 4.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 295 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKK 399
+D R+ S+ SLQ + I+E +L+LFP+G +
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTR 175
>UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative;
n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1,
putative - Plasmodium chabaudi
Length = 682
Score = 31.5 bits (68), Expect = 7.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 298 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGDAN 420
DP R+ + +S +QR K Y+ ++ + + KK KG+A+
Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658
>UniRef50_Q6RKJ4 Cluster: Polyketide synthase; n=4;
Sclerotiniaceae|Rep: Polyketide synthase - Botrytis
cinerea (Noble rot fungus) (Botryotinia fuckeliana)
Length = 2511
Score = 31.5 bits (68), Expect = 7.4
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 383 NSIRRALYSFIL*TLICNDSTDLLRLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLV 204
+SI +A +S L T + DLL+L G T +V ++G AA + R+ A +
Sbjct: 604 SSIEKAEFSQPLCTALQIALVDLLKLIGVTFSAVVGHSSGEIGAAYAAGRLTAGDAIRIA 663
Query: 203 WYRTV-GHRTIGRNGPAAGRGATALAF 126
+YR + H G+ G A L+F
Sbjct: 664 YYRGLHAHLAKGKGGEEGSMMAAGLSF 690
>UniRef50_A6T0S2 Cluster: Mechanosensitive ion channel protein; n=1;
Janthinobacterium sp. Marseille|Rep: Mechanosensitive
ion channel protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 284
Score = 31.1 bits (67), Expect = 9.7
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 226 GFTLREIRA---AGLNPVFART--IGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 390
GF L+++ + +GL + A+T IG + +VE +QI I+ Y RL+L P
Sbjct: 107 GFALKDVLSNLVSGLFILIAQTFEIGDQIVVGETEGTVERIQIRATHIRTYDGRLVLVPN 166
Query: 391 GK 396
G+
Sbjct: 167 GE 168
>UniRef50_A0TLH8 Cluster: Putative uncharacterized protein; n=3;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia ambifaria MC40-6
Length = 508
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 217 AGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQR 351
+GRG R +RAA L+P A + IA+ R R + E L+++++R
Sbjct: 50 SGRGADRRHLRAARLHPEEAARLRIALSARARGR--EGLRVDLRR 92
>UniRef50_Q4WCW8 Cluster: C2H2 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C2H2 finger domain protein, putative
- Aspergillus fumigatus (Sartorya fumigata)
Length = 336
Score = 31.1 bits (67), Expect = 9.7
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 234 SESSTGAYFSMVPNSWASHYRT*RP 160
SE STG+YFS VP S+ RT +P
Sbjct: 35 SEQSTGSYFSAVPTHTTSYSRTPQP 59
>UniRef50_Q5YYA4 Cluster: Tyrosyl-tRNA synthetase; n=48; cellular
organisms|Rep: Tyrosyl-tRNA synthetase - Nocardia
farcinica
Length = 429
Score = 31.1 bits (67), Expect = 9.7
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -2
Query: 326 STDLLRLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAG 150
STDL LR + A + GF+P A + +P L ++ GHR I G A G
Sbjct: 18 STDLDALRAALAAGPLTLYAGFDPTAASLHAGHLVPLLALKRFQRAGHRPIVLAGGATG 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,285,679
Number of Sequences: 1657284
Number of extensions: 8599618
Number of successful extensions: 23302
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 22789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23285
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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