Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0057
(681 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 216 3e-57
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 215 4e-57
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.36
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 27 2.5
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.3
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 27 3.3
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 3.3
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 27 3.3
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 3.3
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 3.3
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 26 4.4
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 7.7
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 216 bits (527), Expect = 3e-57
Identities = 94/153 (61%), Positives = 124/153 (81%)
Frame = +3
Query: 48 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 227
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 228 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 407
V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEG 119
Query: 408 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 506
+LG ++ FD G++L+ TV+ + GEE +A +
Sbjct: 120 ELGNEIEEGFDEGRDLIITVVSAMGEETALACR 152
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 215 bits (526), Expect = 4e-57
Identities = 94/153 (61%), Positives = 124/153 (81%)
Frame = +3
Query: 48 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 227
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 228 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 407
V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEG 119
Query: 408 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 506
+LG ++ F+ GK+L+ TV+ + GEE +A +
Sbjct: 120 ELGNEIEEGFEEGKDLIITVVSAMGEEIALACR 152
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.9 bits (64), Expect = 0.36
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + +LTA+ S+P S+V N+S P++ S V P + S ++ SS
Sbjct: 2558 SSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSP 371
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1178 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPIT 1237
Query: 370 LSAI 359
S+I
Sbjct: 1238 SSSI 1241
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1358 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2198 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N S P++ S V + P + S +L SS
Sbjct: 1346 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 1401
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S V P + S +L SS
Sbjct: 1413 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1490 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2186 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2241
Score = 27.5 bits (58), Expect = 1.9
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -3
Query: 550 PINAELVYLSRAVFALTAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
PI + V S +++ +SS P STV N S P++ S V + P + S +L SS
Sbjct: 803 PITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ ++ S + + + + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1238 SSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1658 SSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1713
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1154 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1209
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1466 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1521
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2493 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2793 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + TA+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3410 SSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 477 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 885 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1041 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1821 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2013 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2589 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 2738 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 2793
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSP 371
++ ++ S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3122 SSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAIT 3181
Query: 370 LSAI 359
S+I
Sbjct: 3182 SSSI 3185
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ ++ S V + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3350 SSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2481 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2781 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + TA+ S+P STV N+S P++ S + + P + S L +S
Sbjct: 3026 SSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 3081
Score = 25.8 bits (54), Expect = 5.8
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -3
Query: 550 PINAELVYLSRAVFALTAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
PI + V S +++ +SS P STV N+S P++ S + P + S +L SS
Sbjct: 407 PITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 465
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSK-SVRN-CVPRSPSGILRSS 383
++ +V S + + + + S+P STV N S P+++ SV N P + S +L SS
Sbjct: 554 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSS 609
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 945 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 993
Score = 25.8 bits (54), Expect = 5.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -3
Query: 550 PINAELVYLSRAVFALTAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
PI + V S +++ +SS P STV N S P++ S + P + S +L SS
Sbjct: 1091 PITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 1149
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1881 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 1929
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2073 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 2121
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 2181 STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 2229
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
S + + T + S+P STV N+S P++ S V P + S ++ SS
Sbjct: 2253 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSS 2301
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N S P++ S V + P + S L +S
Sbjct: 2258 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2313
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ ++ S + + + + S+P STV N S P++ S + + P + S +L SS
Sbjct: 758 SSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSS 813
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 1370 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2210 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 544 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 383
++ +V S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2498 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.1 bits (57), Expect = 2.5
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +3
Query: 324 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAV 503
+ D SD G + +N ++ D +L L T +GK C + +C++A
Sbjct: 2846 ILDASDPGNYSNNIENPYTKD---FEDSNLAYVLYTSGSTGKPKGCCLTHHNVVQCMLAF 2902
Query: 504 KANTALDK*TNSAFIGLTNF*F 569
+ A + TNS F+ +F F
Sbjct: 2903 QDQFAGEWDTNSRFLAFASFHF 2924
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 285 NMDVPHVKREDYQLTDISDDGYL 353
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 484 RSASSPSKQTQLSTNKPTQH 543
+S SSPS+ + LST+KP H
Sbjct: 286 KSESSPSRSSVLSTSKPEVH 305
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 108 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK-HGHAKVHLVGIDIFNGKKY 260
P +CS ++ ++ C V G+ H H++G+D+ NG Y
Sbjct: 35 PRRCSTCKRINKRSIRCLSCHSVGCLWGHHGEEHAMEHTHMIGVDVKNGHTY 86
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 201 KHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDY 320
K A L+ D F+G ++ IC S N+ + V ED+
Sbjct: 878 KEADAYAPLLAYDKFDGDEFACICESMKNVKLDFVTLEDW 917
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 192 KTGKHGHAKVHLVGIDIFNGK-KYEDICPSTHNMDVPHVKRED 317
K G+H A +++ + N K +D CPST D+ H+ R D
Sbjct: 164 KIGQHLSAMGYVIPKEWTNTMVKLQDRCPSTSLKDIDHLFRVD 206
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 140 FRYAEGSSMQDC*NVHIQNRKARPR*SSLGWD 235
+ + E +Q C N+ +N +A R SS GWD
Sbjct: 41 YHHLEKGLLQQCFNLVKKNMEALYRQSSFGWD 72
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 459 CTVLKSCGEECVIAVKANTALDK*TNSAFIGLTNF*FFTINNSYINVKHNIVY 617
C V+ E + NT D +N IG FF +N +++NVK ++Y
Sbjct: 219 CVVINKDSEFLQMCRPINTTQD--SNEHSIGSL---FFYLNYNFVNVKRQVIY 266
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 303 VKREDYQLTDISDDGYL 353
+KREDY+LT ++ GYL
Sbjct: 91 IKREDYELTLCANCGYL 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,839,544
Number of Sequences: 5004
Number of extensions: 59556
Number of successful extensions: 300
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -