Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0056
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086) 35 0.072
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 33 0.17
SB_58746| Best HMM Match : RA (HMM E-Value=0.85) 31 0.89
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 1.2
SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10) 30 2.1
SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 29 4.8
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_1589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_51795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10488| Best HMM Match : aPHC (HMM E-Value=0.82) 28 6.3
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 28 8.3
SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086)
Length = 404
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -1
Query: 483 ESAHLVFTSLMVVDVFVHGY----MDGIGLRDGHLYFFFDLNGIRLFDFIGHWFFD--RV 322
+S + VF L V + GY + G+ + +G Y F L G+R+ + G+W F+ RV
Sbjct: 275 DSGYWVFGLLSVRVIEGSGYWVFGLLGVRVIEGSGYLMFGLLGVRVIEGSGYWVFELLRV 334
Query: 321 RYWFFNNLVDNLINRYMDRLLHC 253
R+++ + I Y + C
Sbjct: 335 RHYYATTWSRSAIGDYQPSIKGC 357
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1
Query: 139 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 246
P+H T + VP P PV S PQ KVPIP PYPV
Sbjct: 447 PFH-TPPRVEHVPFPIPVH-SPPQIEKVPIPFPYPV 480
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1
Query: 172 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 267
VPIP P V P +K P PYPV V V QP
Sbjct: 472 VPIPFPYPVPSPPQIK---PMPYPVPVPVRQP 500
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/105 (29%), Positives = 48/105 (45%)
Frame = +2
Query: 104 SPKATRTQNTRSRTM*PW*RRSEFRFPIRWLCRSRST*RCPYLNPTRSTSQWSNLSMYLF 283
S ++ + +RSR+ P R+ + P R RS R +P R TS+WS+ S
Sbjct: 622 SSRSRSSSYSRSRSRSPDRRKRSYSPPPR----RRSPFRERRRSPPRRTSRWSSQSPDRR 677
Query: 284 IRLSTKLLKNQYRTRSKNQCPMKSKSLIPLRSKKK*RCPSLSPIP 418
K + R+RS++ P SKS P SK + + +P P
Sbjct: 678 SPARIKSSPARSRSRSQSASPRHSKSKSPALSKVQVKTEKKTPSP 722
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 166 IGVPIPHPVAVSVPQYVKVPIPQPYPV 246
+ VP+P PV V VP + + P+P P P+
Sbjct: 1092 VPVPVPVPVRVPVPMHQQSPLPMPRPI 1118
>SB_58746| Best HMM Match : RA (HMM E-Value=0.85)
Length = 820
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 341 VFDMFGYSVFDMFGYSVFDMFCYSVFDLFGYSVFDMFGYSVFDMFGYSVFD 391
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 309 VFDMFGYSVFDLFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFD 359
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 389 VFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFD 439
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FDL G +FD G+ FD Y F+
Sbjct: 293 VFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDLFGYSVFD 343
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 365 VFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 415
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 413 VFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 463
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 421 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 471
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 429 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 479
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 437 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 487
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 445 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 495
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 453 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 503
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 461 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 511
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 469 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 519
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 477 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 527
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 485 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 535
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 269 VFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 319
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 277 VFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFD 327
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 373 VFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFDLFGYSVFD 423
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 397 VFDMFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFGYSVFD 447
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 450 VVDVFVHGYMD--GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVRYWFFN 304
V D+F + D G + D Y FD+ G +FD G+ FD Y F+
Sbjct: 317 VFDLFGYSVFDMFGYSVFDLFGYSVFDMFGYSVFDMFGYSVFDMFCYSVFD 367
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 121 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 255
H H P+ V V + VP PV V VP V+VP+P PV+ T
Sbjct: 208 HHHHHHPFPVRV--PVRVPFRVPVRVPVP--VRVPVPIHSPVYPT 248
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 115 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQP-YP 243
H H H P V V VP+ PV V VP VPI P YP
Sbjct: 208 HHHHHHPFPVRVPVRVPFRVPVRVPVPVRVP----VPIHSPVYP 247
>SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10)
Length = 306
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 106 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYP 243
P+G + EHT ++ ++ I I +PV + V VP +P P
Sbjct: 145 PKGSQNNEHTSNNYINILVTIRTEIVYPVRPVIGAAVAVPDRRPCP 190
>SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = -1
Query: 354 DFIGHWFFDRVRYWFFNNLVDNLINRYMDRLLHCDVDRVGLRYGHLHVLRDRHSHRMGNR 175
D +W D R ++ ++RY + D R +R H +RD+H +R+ +
Sbjct: 16 DMHRYWLGDMQRMSKISDKQRYDVHRYWLGDMQRDKHRNRIRDNKRHAIRDKHRNRIRDN 75
Query: 174 NSDLLHHGHMVRLR 133
+ H+ R+R
Sbjct: 76 KRHAIRDKHIQRIR 89
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 133 TKPYHVTVVKKIGV--PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 267
+KP +K V P P +S P + +P+P P PV V QP
Sbjct: 96 SKPMREDAKRKFLVLAPFPRMPLISPPLPMYIPVPVPQPVPQPVPQP 142
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 130 HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQ 264
HT P H+ +I P+PH + IP P P H T Q
Sbjct: 976 HTSPAHLATASQITHPLPHRT---------ISIPYPSPPHTTSSQ 1011
>SB_1589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 417 GIGLRDGHLYFFFDLNGIRLFDFIGHWFFDRVR 319
GI D + D +R+F+F G+W F+ +R
Sbjct: 10 GIKPNDSWICLRDDFGDVRVFEFSGYWMFELLR 42
>SB_51795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.3 bits (60), Expect = 6.3
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = -1
Query: 372 NGIRLFDFIGHWFFDRVR 319
+G R+F+F+G+W F+ +R
Sbjct: 30 SGYRMFEFLGYWMFELLR 47
>SB_10488| Best HMM Match : aPHC (HMM E-Value=0.82)
Length = 208
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = -1
Query: 369 GIRLFDFIGHWFFDRVRYWFFNNLVDNLINRYMDRL-----LHCDVDRVGLRYG 223
G+ L I W F R R+W+ + L Y+ L LH DVD L +G
Sbjct: 50 GLLLLTIITQWIFKRYRFWYVH--YTGLALAYVTILAIFHDLHVDVDLYALVFG 101
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 69 SARQRSAF*RMGARRPHAHRTHEAVPCDRGEEDRSSDSPS 188
S ++RS R +RPH R+HE +R EE+R+ + S
Sbjct: 461 SHKERSQEKRSHEKRPHEERSHE----ERSEEERTHEERS 496
>SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 121 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 231
+ + T PY V + V +P+ V V+VP YV V +P
Sbjct: 58 YVDGTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 93
>SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 121 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 231
+ + T PY V + V +P+ V V+VP YV V +P
Sbjct: 58 YVDGTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 93
>SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1499
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 166 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 258
+ P P V V+ P V+VP P PV V V
Sbjct: 839 VATPPPVRVTVATPPPVRVPAATPLPVRVPV 869
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,008,021
Number of Sequences: 59808
Number of extensions: 474002
Number of successful extensions: 1617
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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