Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0054
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.25 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   9.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 244 CRHRHMSKWYPNRYRLLCRCPYLSPSCRR 158
           CR+  + +WY    +    CPY +  C R
Sbjct: 57  CRYTFLLEWYHTLSKACYDCPYNTQDCYR 85


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 184 PYLSPSCRRHK-RPRPPKLARTNSTAS*PCKIYRLKDSEINKN 59
           PY S     H  + RPP+ +  +++ +  CK+Y   + + N N
Sbjct: 47  PYASSQHHHHHLQARPPQDSPYDASVAAACKLYS-SEGQQNSN 88


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 100 CKIYRLKDSEINKNLNKIIF 41
           C   +LK  EI  ++NK+IF
Sbjct: 288 CDKVQLKIGEIKYSVNKLIF 307


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 480 AVLFNDLEGEELNIMLYSLVTPFTTNQTLGIK 385
           AVL ++L+ E++ + L S+    T    LG++
Sbjct: 16  AVLIDELKNEDVQLRLNSIKKLSTIALALGVE 47


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 364 TNPENTVFDAKRLIGREWSDQTVQH 438
           T PE     AK +IG+++S   V H
Sbjct: 462 TAPEQVQRAAKCIIGKDYSLPMVNH 486


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 284 TASHLHTWP 310
           T +HLH WP
Sbjct: 208 TPNHLHIWP 216


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 284 TASHLHTWP 310
           T +HLH WP
Sbjct: 208 TPNHLHIWP 216


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 284 TASHLHTWP 310
           T +HLH WP
Sbjct: 208 TPNHLHIWP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,998
Number of Sequences: 336
Number of extensions: 3202
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)