Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0054
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 261 6e-71
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 248 4e-67
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 248 6e-67
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 215 4e-57
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 187 1e-48
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 105 5e-24
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 96 5e-21
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 61 2e-10
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.6
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 25 7.9
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 261 bits (640), Expect = 6e-71
Identities = 124/168 (73%), Positives = 144/168 (85%)
Frame = +1
Query: 190 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 369
GTVIGIDLGTTYSCV V KNGRVEIIANDQGNRITPSYVAFT+D ERL+G+AAKNQ +N
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTED-ERLVGEAAKNQAPSN 93
Query: 370 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAM 549
PENT+FD KRLIGR++ ++T+ D+K FPF +V ++P V+V K F PEEISAM
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 550 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
+L+KMK+TAEAYLGK VTHAVVTVPAYFNDAQRQATKDAGTI+GLNV+
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVI 201
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 248 bits (608), Expect = 4e-67
Identities = 121/165 (73%), Positives = 137/165 (83%)
Frame = +1
Query: 199 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 378
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 379 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 558
T+FDAKRLIGR++ D VQ D+K +PFKV+ K+ KP +QV+ K F PEEIS+MVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 559 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
KM+ETAEAYLG KVT AVVTVPAYFND+QRQATKDAG I+GLNV+
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVL 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 248 bits (607), Expect = 6e-67
Identities = 120/165 (72%), Positives = 138/165 (83%)
Frame = +1
Query: 199 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 378
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 379 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 558
T+FDAKRLIGR ++D VQ D+K +PFKV+EK+ KP +QV+ K F PEEIS+MVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 559 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
KM+E+AEA+LG KVT AVVTVPAYFND+QRQATKDAG I+GLNV+
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVL 168
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 215 bits (526), Expect = 4e-57
Identities = 105/165 (63%), Positives = 125/165 (75%)
Frame = +1
Query: 199 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 378
IGIDLGTTYSCV V++ VEII NDQG R TPS+VAFT+ ERL+GDAAKNQ NP N
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRN 67
Query: 379 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 558
TVFDAKRLIGR + D Q D+K +PFKV++ N P ++V K F +EISAMVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 559 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
KMKE +EA L K+V AV+TVPAYF+D+QR ATKDAG I+GLNV+
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVL 172
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 187 bits (456), Expect = 1e-48
Identities = 93/168 (55%), Positives = 122/168 (72%)
Frame = +1
Query: 190 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 369
G VIGIDLGTT SC+ + + ++IAN +G R TPS VAFT+DGERL+G +AK Q N
Sbjct: 50 GPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVIN 109
Query: 370 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAM 549
PENT F KRLIGR + + VQ D+K P+K+VE +S ++ ++G K ++P +I
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVE-HSNGDAWLE-ARG-KTYSPSQIGGF 166
Query: 550 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
+L+KM+ETA YLGK V +AVVTVPAYFND+QRQATK AG I+GLNV+
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVL 214
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 105 bits (253), Expect = 5e-24
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Frame = +1
Query: 196 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 375
V+GID G + + + V +N +++I N+ NR TPS V++ + R +G+AAK+ +N
Sbjct: 7 VVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERS-RFLGEAAKSAEASNFR 65
Query: 376 NTVFDAKRLIGREWSDQTVQH-DVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMV 552
NTV KRL GR + D ++ + F K+ E + +VQ + F+ ++ A
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 553 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLN 687
TK+K AEA L V+ V+++PA+F D QR+A +A I+GLN
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLN 170
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 95.9 bits (228), Expect = 5e-21
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +1
Query: 193 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 372
TVIGI G S + ++G+ +++AN++GNR PS +++ D E G A+ QL N
Sbjct: 25 TVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNA 83
Query: 373 ENTVFDAKRLIGREWSDQTVQH-DVKFFPFKVVEK-NSKPHVQV--QTSQGDKVFAPEEI 540
+N+V + + L+G+ + T+ H P V + K VQ ++ +K+ E
Sbjct: 84 DNSVTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEA 143
Query: 541 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
S L ++ E+AE +LG KV V++VP YF DAQR+A + A +GL V+
Sbjct: 144 SVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVL 194
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 60.9 bits (141), Expect = 2e-10
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Frame = +1
Query: 193 TVIGIDLGTTYSCVGVYKNG-RVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 369
+V+ ID GT ++ + K G +EI+ R S VAF + ER+ G A N T
Sbjct: 23 SVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAF-KGNERIFGVDASNLATRF 81
Query: 370 PENTVFDAKRLIGREWSDQT-VQHDVKFFPFKVVEKNSKPHVQVQTSQGDKV-FAPEEIS 543
P +++ + K L+ + VQ +P + +N + + D+ ++ EEI
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141
Query: 544 AMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 693
AM + AE +K+T V+TVP +FN+ QR +A I +V+
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVL 191
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 666 SIFGCLTLSIIEISRHSNNSMSNLFSKVSLSSLLHFSQNHS 544
+I G + L+ I ++N +N+F L+ L HF + S
Sbjct: 2586 NILGRIALAFTSIDENANLESANIFEHARLALLQHFMDHSS 2626
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 322 GERLIGDAAKNQLTTNPENT 381
GE ++ D+ N TNP+NT
Sbjct: 6 GENIVSDSIVNMELTNPDNT 25
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,657,164
Number of Sequences: 5004
Number of extensions: 52850
Number of successful extensions: 167
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -