Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0050
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 149 2e-36
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 145 2e-35
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 126 2e-29
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 91 5e-19
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 9e-19
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 62 4e-10
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 55 6e-08
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 52 5e-07
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 42 4e-04
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_58467| Best HMM Match : 7tm_1 (HMM E-Value=3.6e-10) 29 4.2
SB_36238| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_54463| Best HMM Match : TolA (HMM E-Value=0.39) 28 5.5
SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7) 28 5.5
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 27 9.7
SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_12852| Best HMM Match : Mic1 (HMM E-Value=0.32) 27 9.7
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 149 bits (360), Expect = 2e-36
Identities = 70/87 (80%), Positives = 78/87 (89%)
Frame = +1
Query: 37 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 216
QP I+LL+EGTD +QG PQL+SNI+ACQ + DAVRTTLGPRGMDKLIVD GKA ISNDG
Sbjct: 638 QPGIILLKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISNDG 697
Query: 217 ATIMKLLDIIHPAAKTLVDIAKSQDAE 297
ATI+ LLDI+HPAAKTLVDIAKSQDAE
Sbjct: 698 ATIINLLDIVHPAAKTLVDIAKSQDAE 724
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 145 bits (352), Expect = 2e-35
Identities = 74/183 (40%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Frame = +1
Query: 46 ILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVD--HNGKAVISNDGA 219
+ +L +G ++ + + +S+ + D V++TLGP+GMDK++ NG ++NDGA
Sbjct: 6 VSILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDGA 65
Query: 220 TIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIR 399
TI+K + I +PAAK LV+++K QD EVGDGTTSV +L E+LK + V +HP+ ++
Sbjct: 66 TILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVA 125
Query: 400 AVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAV 579
R + + A EK E A + PE+ R+ L+ A T +SSK++ Q +DHF+K+ VDAV
Sbjct: 126 GWRKSVK-AAEKALEAAAVDHSSDPEKFREDLMNIARTTLSSKILVQHRDHFAKLAVDAV 184
Query: 580 LSL 588
L L
Sbjct: 185 LRL 187
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 126 bits (303), Expect = 2e-29
Identities = 61/164 (37%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Frame = +1
Query: 100 SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIA 279
S+I A + V ++T+LGP+GMDK++V +G+ ++NDGATI+ ++++ H AK +V+++
Sbjct: 34 SHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELS 93
Query: 280 KSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 459
KSQD E+GDGTT VV+LAG +L+ + ++ G+HP + A+++A+E + A
Sbjct: 94 KSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIA--- 150
Query: 460 DN-KSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 588
DN ++ ++ L++ A T + SK++ + ++I VDAVLS+
Sbjct: 151 DNFPVDKDNKESLIQTAMTTLGSKIVSRCHRPLAEIAVDAVLSV 194
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 91.5 bits (217), Expect = 5e-19
Identities = 47/105 (44%), Positives = 67/105 (63%)
Frame = +1
Query: 274 IAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAV 453
++K QD EVGDGTTSV +LA E+LK + V +HP+ ++ R + + A EK E A
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAA 60
Query: 454 KIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 588
+ PE+ RD L+ A T +SSK++ Q +DHF+K+ VDAVL L
Sbjct: 61 VDHSSDPEKFRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRL 105
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 90.6 bits (215), Expect = 9e-19
Identities = 48/125 (38%), Positives = 77/125 (61%)
Frame = +1
Query: 241 IIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASR 420
I HP A + +A +QD GDGTTS V++ GE+LK+ +V EG+HPR++ A +
Sbjct: 171 IQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKK 230
Query: 421 LAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPL 600
A+E ++E VK+ S E RD L+ A T++ +K+ + D +++VVDAVL++ P
Sbjct: 231 KALEVLEE--VKV---SREMDRDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIRKPK 285
Query: 601 LPLDM 615
P+D+
Sbjct: 286 KPIDL 290
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/82 (46%), Positives = 61/82 (74%)
Frame = +1
Query: 202 ISNDGATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVH 381
++NDG I++ + + HPAAK++++I+++QD EVGDGTTSV+ILAGE + +PF+E+ +H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 382 PRVLIRAVRTASRLAIEKIKEQ 447
P +I A R A I+ +K+Q
Sbjct: 61 PTQIIAAYRLAMDDMIDILKQQ 82
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 80.2 bits (189), Expect = 1e-15
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +1
Query: 424 AIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLL 603
AI++IKE AV + E R LL +CA+TA+SSKLI QK+ F+K+VVDAV+ LD LL
Sbjct: 1 AIKRIKELAVHVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLD-ELL 59
Query: 604 PLDMIGIKKV 633
PLDMIG+KKV
Sbjct: 60 PLDMIGMKKV 69
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 77.8 bits (183), Expect = 7e-15
Identities = 34/71 (47%), Positives = 53/71 (74%)
Frame = +1
Query: 235 LDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTA 414
+ + HPAAK++++I+++QD EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
Query: 415 SRLAIEKIKEQ 447
I+ +K+Q
Sbjct: 269 MDDMIDILKQQ 279
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Frame = +1
Query: 85 KPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 246
KPQ + +NI A + V DA+RT+LGP+GMDK+I NG I+NDGATI KL+D +
Sbjct: 21 KPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI-KLIDTV 75
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +1
Query: 124 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI----IHPAAKTLVDIAKSQD 291
+ DAV TLGP+G + +I G I+ DG T+ K +++ + A+ + D+A + +
Sbjct: 79 LADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKAIELKDKYQNIGARLVQDVANNTN 138
Query: 292 AEVGDGTTSVVILAGEILKRLKPFVEEGVHPR 387
E GDGTT+ +LA I V +G +P+
Sbjct: 139 EEAGDGTTTATVLARSIATEGFLHVSKGANPQ 170
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +1
Query: 106 INACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKS 285
+ CQ ++ + GP G+D ++ +G +I+N G+ I++ L + +P + +V+ A+S
Sbjct: 6 LQTCQNFERILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARS 65
Query: 286 QDAEVGDGTTSVVILAGEILKRL 354
G G + +I+ EI + +
Sbjct: 66 LSGRTGSGASYFIIILAEIFREI 88
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +1
Query: 484 RDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 588
RD ++ A+TA+SSKLI QQ D F+ ++VDAV+++
Sbjct: 10 RDCIVSAANTALSSKLIGQQGDFFANMIVDAVMAV 44
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 334 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 447
GE + +PF+E+ +HP +I A R A I+ +K+Q
Sbjct: 2 GEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 39
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -2
Query: 377 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAISTRVLAAG*MISSSFMIVAPSFDIT 198
TP+++N F + T V+P PTSAS S+ I+++ V PS T
Sbjct: 447 TPTASNAFTETTTVTSTTTITVLPQPTSASSSITPSSTPATGTATIATATYSVPPSVAPT 506
Query: 197 A 195
A
Sbjct: 507 A 507
>SB_58467| Best HMM Match : 7tm_1 (HMM E-Value=3.6e-10)
Length = 340
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 502 CASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVP 636
C+ST SS IHQ+ S ++V ++ L L + ++ +KKVP
Sbjct: 19 CSSTERSSASIHQEVWLVSLLLV-VIIGLSLNLSVISLVMMKKVP 62
>SB_36238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 406 RTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVD 573
RTA + I + + +S +E LL+C ++SK QK++ +KI++D
Sbjct: 50 RTAENSSYPSIASEISSVARESRDED---LLRCDEVTINSKDEETQKENGNKIIID 102
>SB_54463| Best HMM Match : TolA (HMM E-Value=0.39)
Length = 461
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 19 NKFNKMQPQILLLREGTDQTQGKPQLVS-NINACQLVVDAVRTTLGPRGMDKLIVDHNGK 195
N++ K + + E +T+G+ VS N N LV DA G D+ + +
Sbjct: 11 NQYLKKSEESSSVEEPQLETRGEDNRVSENGNYANLVTDAGVLLAPNEGNDRELPSGHTP 70
Query: 196 AVISNDGATIMKLLDIIHPAAKTLVDIAKSQD 291
+NDG T + ++H A+ AK ++
Sbjct: 71 PTSANDGDTSKENQQLLHKCAQAQKKKAKRKN 102
>SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7)
Length = 256
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 36 ATANTFTEGGNGPDAGQA-PARLQHQC-LSTCRRCGQNHPGSPWDGQADCRSQWK 194
+ AN+ T GN D Q P+ L H+ S RRC + H P D A + W+
Sbjct: 69 SVANSRTFLGNKKDLNQTQPSPLAHRTQASHPRRCHRGHLTIPVDVHATADNDWR 123
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 376 VHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRD---LLLKCAS 510
V P + + R A R+ K + DNK P+E+ D L KCAS
Sbjct: 863 VRPTYMYKHCRLACRVCTPVKKHEGPPCDNKDPDEECDHWAKLGKCAS 910
>SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1388
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 93 ARLQHQCLSTCRRCGQN--HPGSPWDGQADCRSQWK 194
+RLQH+C++ C CG++ P P + D R WK
Sbjct: 412 SRLQHKCVNLCYGCGESDCSPLVP-PPEQDHRWDWK 446
>SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 85 KPQLVSNINACQLVVDAVRTTLGPRGMD 168
K L+S I C LV +A +T+G +G D
Sbjct: 26 KKDLISEIRHCYLVSNAYPSTVGAKGFD 53
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/100 (22%), Positives = 45/100 (45%)
Frame = +1
Query: 334 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCAST 513
GE+ K ++ E H + L RA + EK+K+Q + + E +++LL +
Sbjct: 1814 GEVEKNMEELKSE--HSKELARAAAEFN----EKLKDQKESHEKGAGEREKELLQQVEEL 1867
Query: 514 AMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKV 633
+ K + Q+ + + +DA+ L+ I+K+
Sbjct: 1868 STQVKTLEQRIEQLVIVKMDALHDQKATLIEEHNTAIEKL 1907
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 111 CLSTCRRCGQNHPGSPWDGQADCRSQWKGGYI-KRWSNDHEATGYHSPCR*NSCGYC 278
C TC C N SP+ GQ +C S + G K+ + D C G C
Sbjct: 142 CQGTCD-CKNNATCSPFTGQCNCTSGFTGDRCEKQCAGDSGGVDCRQHCNCTEWGTC 197
>SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 448 AVKIDNKSPEEQRDLLLKCASTAMSSKLI 534
A + NK+ EE++D+++ C S + +K +
Sbjct: 509 ATRFTNKTEEEKKDIIINCLSKYIGTKAL 537
>SB_12852| Best HMM Match : Mic1 (HMM E-Value=0.32)
Length = 1077
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 400 AVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCA-STAMSSKLIHQQKDHFSKIVVDA 576
A ++A RLA IKE A+K +K EE L K + +T + +I Q SK++
Sbjct: 788 AKKSAKRLAKRAIKE-AMKTTSKVAEETTKTLGKASVATGQGTNVIAQGVKQTSKVIESG 846
Query: 577 V 579
V
Sbjct: 847 V 847
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,908,055
Number of Sequences: 59808
Number of extensions: 423285
Number of successful extensions: 1268
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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