Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0048
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 633 LSRPFTRHILMPPFYKIAFFF 571
           ++RP T+ I +PP Y++  +F
Sbjct: 149 ITRPDTKFIQLPPLYEMCPYF 169


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 633 LSRPFTRHILMPPFYKIAFFF 571
           ++RP T+ I +PP Y++  +F
Sbjct: 149 ITRPDTKFIQLPPLYEMCPYF 169


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 530 HY*AYYVVKKCIYGKKKAIL*NGGIRIWRVNGR 628
           +Y  Y   K   Y KK+ ++ NG + +  ++GR
Sbjct: 462 YYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGR 494


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,550
Number of Sequences: 438
Number of extensions: 3165
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)