Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0045
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   1.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.4  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 552 YMLSYVTXXXXXXLYDVLNECCMRVMCILLVF 457
           Y+L+ +T       Y  LN CC+ +  + + F
Sbjct: 41  YLLTNLTYNNTNRKYYWLNVCCLNLSIVTIFF 72


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 128 VLIYFVNLILEERKKLTKKI 187
           ++ Y   LILEER KL   I
Sbjct: 48  IVFYMYTLILEERFKLINLI 67


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 590 IRTAEVVLLCTVGICLVMLRC 528
           I  + +V + TV IC +M RC
Sbjct: 724 IAVSGLVYIATVWICTLMNRC 744


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 618 PIPPRTLTQRSFMTL*NILSALNRPKQYL 704
           P P RTL + SF+     + +L + K Y+
Sbjct: 120 PEPARTLLEHSFVAFNTNIISLVQNKDYV 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,921
Number of Sequences: 336
Number of extensions: 3313
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)