Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0045
(704 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 2.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 2.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.6
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 408 ININNTKQRKPLLRIF 455
ININ+ K+ K ++RIF
Sbjct: 505 ININSDKETKGMMRIF 520
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 408 ININNTKQRKPLLRIF 455
ININ+ K+ K ++RIF
Sbjct: 505 ININSDKETKGMMRIF 520
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 306 VSNKTS*NNNRIKLYK*NNKHETK*IVSVAVKAFININNTKQ 431
+SNKT NNN K NN + K + NIN +Q
Sbjct: 85 LSNKTIHNNNNYKYNYNNNNYNNN-----CKKLYYNINYIEQ 121
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 306 VSNKTS*NNNRIKLYK*NNKHETK*IVSVAVKAFININNTKQ 431
+SNKT NNN K NN + K + NIN +Q
Sbjct: 85 LSNKTIHNNNNYKYNYNNNNYNNN-----CKKLYYNINYIEQ 121
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 306 VSNKTS*NNNRIKLYK*NNKHETK*IVSVAVKAFININNTKQ 431
+SNKT NNN K NN + K + NIN +Q
Sbjct: 85 LSNKTIHNNNNYKYNYNNNNYNNN-----CKKLYYNINYIEQ 121
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +2
Query: 575 LLPYESRATRKMTPPDPTENTNSTFFYDTI 664
LLP + + KM PP +F+ T+
Sbjct: 40 LLPEDPKLYDKMRPPKKDGQATVVYFHVTV 69
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 94 YNNNYNNYNKHNYNKL 109
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 327 YNNNYNNYNKHNYNKL 342
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 56 YNNRRNSLKKHSCDKI 9
YNN N+ KH+ +K+
Sbjct: 327 YNNNYNNYNKHNYNKL 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,078
Number of Sequences: 438
Number of extensions: 3887
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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