Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0044
(475 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5D69 Cluster: PREDICTED: similar to pom1; n=1;... 64 2e-09
UniRef50_UPI0000E22664 Cluster: PREDICTED: twinkle; n=1; Pan tro... 36 0.35
UniRef50_Q96RR1 Cluster: Twinkle protein, mitochondrial precurso... 36 0.35
UniRef50_Q16JS5 Cluster: Pom1; n=2; Endopterygota|Rep: Pom1 - Ae... 36 0.60
UniRef50_Q9HFL6 Cluster: CigB protein; n=1; Mucor circinelloides... 34 1.8
UniRef50_UPI00006CFE78 Cluster: Toprim domain containing protein... 33 3.2
UniRef50_Q1L7I7 Cluster: Mitochondrial helicase twinkle; n=1; Ac... 33 3.2
UniRef50_Q8ZS53 Cluster: All7659 protein; n=2; Nostocaceae|Rep: ... 32 5.6
UniRef50_Q9R714 Cluster: B protein; n=4; Agrobacterium|Rep: B pr... 32 5.6
UniRef50_Q1L7I8 Cluster: Mitochondrial helicase twinkle; n=1; Ha... 32 7.4
UniRef50_A0CHT6 Cluster: Chromosome undetermined scaffold_184, w... 32 7.4
UniRef50_O60106 Cluster: Ubiquitin-protein ligase E3; n=1; Schiz... 32 7.4
UniRef50_A7TNR9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_Q8UD58 Cluster: Putative uncharacterized protein Atu226... 31 9.8
>UniRef50_UPI00015B5D69 Cluster: PREDICTED: similar to pom1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to pom1 -
Nasonia vitripennis
Length = 1146
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Frame = -1
Query: 385 FKSITSRNDWNCYQKQIHNIGLQDIPKITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXT 206
F+S+ S+ + + + ++ +D+ +T EI+++L+ V +G
Sbjct: 532 FESLLSKKVYKTQRARFYHNLAEDVSTVTTLEIKRLLKSASVNVLEGHACLVTNYALCED 591
Query: 205 --EQNCEDSKVYINKTTGYFLCPKCNLHGDWTILERIVKKAKVEVSIKD--YIDKLQNDT 38
+QNC K+YINK TG+F+C CN G WT LERIV+ K + ++ ++ K +
Sbjct: 592 AKKQNC---KLYINKMTGFFMCGNCNRVGPWTTLERIVEPKKTKKKSEEIIFLRKAIDIL 648
Query: 37 ASFKNEWENV 8
+ +W +
Sbjct: 649 PDYSKQWNEL 658
>UniRef50_UPI0000E22664 Cluster: PREDICTED: twinkle; n=1; Pan
troglodytes|Rep: PREDICTED: twinkle - Pan troglodytes
Length = 562
Score = 36.3 bits (80), Expect = 0.35
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = -1
Query: 349 YQKQ-IHNIGLQDIPKITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXTEQNCEDSKV-- 179
Y+K+ + + + +P +TVTEIR+ LR G QDG + Q + V
Sbjct: 40 YRKETLQALDMPVLP-VTVTEIRQYLRGHGIPFQDGHSCLRALSPFAESSQLKGQTGVTT 98
Query: 178 ----YINKTTGYFLCPKCNLHGDW 119
+I+KTTG FLC G W
Sbjct: 99 SFSLFIDKTTGRFLCMTSLAEGSW 122
>UniRef50_Q96RR1 Cluster: Twinkle protein, mitochondrial precursor;
n=34; Eumetazoa|Rep: Twinkle protein, mitochondrial
precursor - Homo sapiens (Human)
Length = 684
Score = 36.3 bits (80), Expect = 0.35
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = -1
Query: 349 YQKQ-IHNIGLQDIPKITVTEIRKVLRQKGFAVQDGFXXXXXXXXXXXTEQNCEDSKV-- 179
Y+K+ + + + +P +T TEIR+ LR G QDG + Q + V
Sbjct: 40 YRKETLQALDMPVLP-VTATEIRQYLRGHGIPFQDGHSCLRALSPFAESSQLKGQTGVTT 98
Query: 178 ----YINKTTGYFLCPKCNLHGDW 119
+I+KTTG+FLC G W
Sbjct: 99 SFSLFIDKTTGHFLCMTSLAEGSW 122
>UniRef50_Q16JS5 Cluster: Pom1; n=2; Endopterygota|Rep: Pom1 - Aedes
aegypti (Yellowfever mosquito)
Length = 671
Score = 35.5 bits (78), Expect = 0.60
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 181 VYINKTTGYFLCPKCNLHGDWTILER 104
+Y+NKTTG+F C C G W +E+
Sbjct: 111 IYVNKTTGHFTCSSCQHLGRWDHIEK 136
>UniRef50_Q9HFL6 Cluster: CigB protein; n=1; Mucor
circinelloides|Rep: CigB protein - Mucor circinelloides
Length = 858
Score = 33.9 bits (74), Expect = 1.8
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = -1
Query: 472 FFLLAHNVKTAITNFEMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIGLQDIPKITVT 293
F +L HN I +L SIR RY + N QKQ HNI P +VT
Sbjct: 253 FDVLVHNSVKKIIIRHILSSIRRKRYYMKRSFHFKNGNKNSTQKQRHNINAATQPLFSVT 312
Query: 292 EIRKVLRQ 269
+ ++ ++
Sbjct: 313 SLHQITQE 320
>UniRef50_UPI00006CFE78 Cluster: Toprim domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Toprim domain
containing protein - Tetrahymena thermophila SB210
Length = 1088
Score = 33.1 bits (72), Expect = 3.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 175 INKTTGYFLCPKCNLHGDWTILERIVKKAKVEVSIKDYIDKLQN 44
I K +G F C +C +HG W + ++ K +SI D+ + QN
Sbjct: 154 IKKQSGQFNCFRCGIHGSWWDFKNLLYK---NISINDFRNYSQN 194
>UniRef50_Q1L7I7 Cluster: Mitochondrial helicase twinkle; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial helicase
twinkle - Acanthamoeba castellanii (Amoeba)
Length = 765
Score = 33.1 bits (72), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 184 KVYINKTTGYFLCPKCNLHGDWTILERI 101
K+YI+K TG F C +C G W +R+
Sbjct: 160 KLYISKRTGQFFCHRCGNKGSWFDFKRL 187
>UniRef50_Q8ZS53 Cluster: All7659 protein; n=2; Nostocaceae|Rep:
All7659 protein - Anabaena sp. (strain PCC 7120)
Length = 731
Score = 32.3 bits (70), Expect = 5.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 193 EDSKVYINKTTGYFL--CPKCNLHGDWTILERIVKKAKVEVSIKDYIDKLQNDTASFKNE 20
+D I+ + FL C + D T L+R+ KAK +++ + Y + D A ++
Sbjct: 208 DDDLQAISDSVSIFLDYCDRAASRQDLTKLKRVANKAKKQIAQERYRKQESADAAQWRAN 267
Query: 19 WENVI 5
WE I
Sbjct: 268 WEETI 272
>UniRef50_Q9R714 Cluster: B protein; n=4; Agrobacterium|Rep: B
protein - Agrobacterium tumefaciens
Length = 227
Score = 32.3 bits (70), Expect = 5.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 157 YFLCPKCNLHGDWTILERIVKKAKVEVSIKDYIDKLQNDTASFKNEWENVI 5
Y+ P ++ W I ER V K + V+ +DY +QN AS + W +++
Sbjct: 2 YYERPVFDIVDTWEIREREVLKPVLSVAEEDYCYFVQNTVASAQRSWVDLV 52
>UniRef50_Q1L7I8 Cluster: Mitochondrial helicase twinkle; n=1;
Hartmannella vermiformis|Rep: Mitochondrial helicase
twinkle - Hartmannella vermiformis (Amoeba)
Length = 724
Score = 31.9 bits (69), Expect = 7.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 184 KVYINKTTGYFLCPKCNLHGDW 119
K+YINK G +LC +C G W
Sbjct: 130 KLYINKDNGSYLCFRCGSRGSW 151
>UniRef50_A0CHT6 Cluster: Chromosome undetermined scaffold_184,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_184,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 809
Score = 31.9 bits (69), Expect = 7.4
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -1
Query: 445 TAITNFEMLHSIRINRYINSFKSITSR---NDWNCYQKQIHNIGLQDIPKI 302
T++ + +++ S + N N K I S+ N W Y K+I+NI + ++ KI
Sbjct: 679 TSVYSQQVMSSYKSNSNFNQIKEIKSKLENNQWAMYLKEIYNIEVDNMIKI 729
>UniRef50_O60106 Cluster: Ubiquitin-protein ligase E3; n=1;
Schizosaccharomyces pombe|Rep: Ubiquitin-protein ligase
E3 - Schizosaccharomyces pombe (Fission yeast)
Length = 486
Score = 31.9 bits (69), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 181 VYINKTTGYFLCPKCNLHGDWTI 113
V NK YF+CP CN DW +
Sbjct: 8 VLFNKIRSYFICPGCNCLPDWPV 30
>UniRef50_A7TNR9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1251
Score = 31.9 bits (69), Expect = 7.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 403 NRYINSFKSITSRNDWNCYQKQIHNIGLQDIPKITVTEIRK 281
++ + +KSI S+N++N Y K I L +P T +EI K
Sbjct: 447 SQILGEYKSILSQNNFNQYSKHAEFINLSILPTYTESEIVK 487
>UniRef50_Q8UD58 Cluster: Putative uncharacterized protein Atu2269;
n=1; Agrobacterium tumefaciens str. C58|Rep: Putative
uncharacterized protein Atu2269 - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 145
Score = 31.5 bits (68), Expect = 9.8
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 357 QSFLLVIDLK--LLMYLFILMECSISKFVIAVFTL 455
QSFLLV+D+ ++ FI+ C +S F+++VF L
Sbjct: 37 QSFLLVMDMPSFFIVSAFIMSLCMVSFFIVSVFML 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,707,703
Number of Sequences: 1657284
Number of extensions: 7377326
Number of successful extensions: 21760
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21756
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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