Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0040
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   289   3e-78
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   287   9e-78
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   284   9e-77
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   284   9e-77
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   284   9e-77
AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p pro...    31   1.9  
AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-P...    31   1.9  
M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up prote...    30   2.5  
AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p pro...    30   2.5  
AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-P...    30   2.5  
AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-P...    30   2.5  
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    30   3.3  
BT029715-1|ABL75772.1|  614|Drosophila melanogaster IP17540p pro...    29   7.7  
BT029676-1|ABL75733.1|  614|Drosophila melanogaster IP17340p pro...    29   7.7  
BT029655-1|ABL75713.1|  614|Drosophila melanogaster IP17240p pro...    29   7.7  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  289 bits (708), Expect = 3e-78
 Identities = 131/160 (81%), Positives = 146/160 (91%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 232
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 412
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEG 119

Query: 413 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 532
           +LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  287 bits (704), Expect = 9e-78
 Identities = 130/160 (81%), Positives = 146/160 (91%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 232
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 412
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 413 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 532
           +LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  284 bits (696), Expect = 9e-77
 Identities = 129/160 (80%), Positives = 145/160 (90%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 232
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 412
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 413 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 532
           +LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  284 bits (696), Expect = 9e-77
 Identities = 129/160 (80%), Positives = 145/160 (90%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 232
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 412
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 413 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 532
           +LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  284 bits (696), Expect = 9e-77
 Identities = 129/160 (80%), Positives = 145/160 (90%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 232
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG 412
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 413 DLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 532
           +LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 204 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 52
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-PA
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 204 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 52
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up protein
           type 1 protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 305
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p
           protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 305
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-PA,
           isoform A protein.
          Length = 746

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 305
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-PB,
           isoform B protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 305
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 45   TQQWVTSKTHTSRPETPGPQPPSPCNVRPCVKT 143
            TQ  +T+ T T+  + P P PP PC   P V T
Sbjct: 2438 TQPTITNTTTTNTTKVPPPVPPKPCT--PVVAT 2468


>BT029715-1|ABL75772.1|  614|Drosophila melanogaster IP17540p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 48  QQWVTSKTHTSR---PETPGPQPPSPCN 122
           ++W+   TH+S    P +PGP P SP N
Sbjct: 5   KRWIYRHTHSSSSATPTSPGPPPVSPTN 32


>BT029676-1|ABL75733.1|  614|Drosophila melanogaster IP17340p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 48  QQWVTSKTHTSR---PETPGPQPPSPCN 122
           ++W+   TH+S    P +PGP P SP N
Sbjct: 5   KRWIYRHTHSSSSATPTSPGPPPVSPTN 32


>BT029655-1|ABL75713.1|  614|Drosophila melanogaster IP17240p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 48  QQWVTSKTHTSR---PETPGPQPPSPCN 122
           ++W+   TH+S    P +PGP P SP N
Sbjct: 5   KRWIYRHTHSSSSATPTSPGPPPVSPTN 32


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,806,857
Number of Sequences: 53049
Number of extensions: 715503
Number of successful extensions: 2410
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2406
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)