Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0038
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   0.53 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   8.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   8.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 295 LSIVTTAAPPFKPKPHYCFTAEIGGAVVPTRADSQE 188
           L+I+    PP +P+P   F + + GA  P   D  E
Sbjct: 168 LAIIACMGPPPQPEPPVTFNS-LNGAHTPLTDDHDE 202


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 364 WLLEPIDIYNVNAPHTLRYKL 302
           WL  P  + N   P +LR+KL
Sbjct: 7   WLTPPHSLGNTVTPVSLRFKL 27


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 83  VRISLEKLVPACGIR 39
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 249 CGFGLKGGAAVVTILRPYNLYL 314
           CGF L  G  + TI+    +YL
Sbjct: 347 CGFFLINGTLLHTIVGAVTVYL 368


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 249 CGFGLKGGAAVVTILRPYNLYL 314
           CGF L  G  + TI+    +YL
Sbjct: 172 CGFFLINGTLLHTIVGAVTVYL 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,079
Number of Sequences: 336
Number of extensions: 2205
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)