Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0033
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    27   0.11 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.5  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   9.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   9.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 659 NLKLLHSKLCNISAVARWLFRPVAMRL 579
           N+K+L     NI++VA+  FRPV + L
Sbjct: 224 NIKVLDLSFNNITSVAKQFFRPVELSL 250


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 147 YFSA*SLCKPPEFLNSLKYW 88
           YF A  L   PEFL++  YW
Sbjct: 423 YFHAAWLKNNPEFLDAFLYW 442


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +2

Query: 113 SGGLHKDQAEKYRNVLMEILKSTEQELSES 202
           +GG ++ + +    +L +I+  T+Q L E+
Sbjct: 29  AGGENEPRKQDIGEILQQIMNITDQSLDEA 58


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 552 RCKLRHSSTEPHCYRPKQP 608
           R ++RH   +P   RPK P
Sbjct: 23  RLRIRHHGDKPPQERPKVP 41


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 163 GDTKKYRTRIIR 198
           G+TK+ RTR IR
Sbjct: 218 GETKRQRTRAIR 229


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 200 SLKAFIEAIVNENVSLVISRQLL 268
           S+ +      NEN SLVI+++L+
Sbjct: 69  SVYSLFRIATNENNSLVINKRLI 91


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 200 SLKAFIEAIVNENVSLVISRQLL 268
           S+ +      NEN SLVI+++L+
Sbjct: 69  SVYSLFRIATNENNSLVINKRLI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,081
Number of Sequences: 336
Number of extensions: 3612
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)