Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0033
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 36 0.042
SB_45945| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_17110| Best HMM Match : PCI (HMM E-Value=2.1e-26) 31 0.90
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 31 1.2
SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1) 31 1.2
SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0) 30 1.6
SB_37975| Best HMM Match : UBA (HMM E-Value=4.6e-10) 30 2.1
SB_48626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_51928| Best HMM Match : HEAT (HMM E-Value=4.9e-22) 29 4.8
SB_48189| Best HMM Match : K-box (HMM E-Value=0.34) 29 4.8
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 29 4.8
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 28 6.3
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 6.3
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 6.3
SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0) 28 6.3
SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8) 28 8.4
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 28 8.4
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 28 8.4
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 35.5 bits (78), Expect = 0.042
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +2
Query: 74 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 253
L+ R+ L + + KD AEK + + L + E++ESL+ F +EN+ +++
Sbjct: 320 LKQAREMFQPLADK--IAKDAAEKGEDRPITFLCARNDEVAESLREFASLPDDENILVIL 377
Query: 254 ---SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVI 361
SR++ VS + + DN + V+++ D +Q R++
Sbjct: 378 DIPSRRVF--VSDNDVITTDNAREFVNNYLADKLQGRLL 414
>SB_45945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 83 VRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAI 226
VRQ LS + S KY+++L + L+ E +L+ +K FIEA+
Sbjct: 5 VRQMLSSVSGSSA----SLAKYKDILEKTLRFDEPKLTRGMKVFIEAV 48
>SB_17110| Best HMM Match : PCI (HMM E-Value=2.1e-26)
Length = 451
Score = 31.1 bits (67), Expect = 0.90
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +2
Query: 359 ISFEEQVASIRQHLADIYERNQNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYL 538
I E + A + LA I E N EAAN+L + +ET + K+E ++ RL L
Sbjct: 134 IYVEIERARLTMMLAKIKENEGNITEAANILQELQVETFGSMERKE-KVEFIMEQMRLCL 192
Query: 539 EVDDPVQAEAFVNRASLLQAETTNEQ-LQIYYKVCYARVLDYRRKFIEAAQRY 694
D ++ + + S + EQ L++ Y + D ++ + Y
Sbjct: 193 AKKDYIRTQIISKKISPKFFDGDKEQDLKLKYYQLLIELADQESNYLATCKHY 245
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.1 bits (67), Expect = 0.90
Identities = 27/91 (29%), Positives = 44/91 (48%)
Frame = +2
Query: 137 AEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTHLALLADNVSQ 316
AEKY + L + + E+ L+ ++ +E I+ + L D +T L L DN
Sbjct: 2037 AEKYLSTL-DPISCDEKSLAREERS-LEGILATAEDHKPNLDSLNDAATSLDALCDNA-- 2092
Query: 317 EVSHFALDVIQPRVISFEEQVASIRQHLADI 409
EV+ + I R + E +A +QHLAD+
Sbjct: 2093 EVTQAEVKDINKRWAAVLEGMADRKQHLADV 2123
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -3
Query: 372 SSNEITLGCITSSAKWETSCETLSASSAKCVLTSVKSCLEITRLTFSLTIASMNAFNDSD 193
SSN +L + S A W + L SS + + C TR FS AS++A +
Sbjct: 629 SSNSDSLSSLRSRASWRLLSDVL-GSSMVSLSVATTPCSSWTRSVFSWMTASISATDPIA 687
Query: 192 NSCSVLFSISIRT 154
+ + F+ S RT
Sbjct: 688 SLKPLSFATSCRT 700
>SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1)
Length = 570
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 554 VQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYR 664
+ A A + +A LL T ++ L + +K+CY L YR
Sbjct: 213 IAATAIITQAVLLCGTTISQPLPLLHKLCYCVALQYR 249
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 554 VQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYR 664
+ A A + +A LL T ++ L + +K+CY L YR
Sbjct: 304 IAATAIITQAVLLCGTTISQPLPLLHKLCYYVALQYR 340
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 569 FVNRASLLQAETTNEQLQIYYKVCYARVLDYR 664
F+ +A LL T ++ L + +K+CY L YR
Sbjct: 146 FITQAVLLCGTTISQPLPLLHKLCYCVALQYR 177
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 569 FVNRASLLQAETTNEQLQIYYKVCYARVLDYR 664
F+ +A LL T ++ L + +K+CY L YR
Sbjct: 438 FITQAVLLCGTTISQPLPLLHKLCYCVALQYR 469
>SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 373
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = +2
Query: 119 GLHKDQAEKYRNVLMEIL----KSTEQELSESLKAFIEAIVNENVSLVISRQLL-TDVST 283
G H++ E+Y+ L + +S + + +++ E++ N ++ +Q+L +ST
Sbjct: 26 GKHREALEQYQQALQVCISTGNESDQAGVRQNIGVLQESLGNYEEAMKYYQQVLQVYIST 85
Query: 284 HLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWKEAANV 448
+V Q + V+Q R+ ++EE + +Q L +YER N + ANV
Sbjct: 86 GNESKQADVRQNIG-----VVQRRLGNYEEAMKYYQQAL-QVYERTGNESKQANV 134
>SB_37975| Best HMM Match : UBA (HMM E-Value=4.6e-10)
Length = 473
Score = 29.9 bits (64), Expect = 2.1
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Frame = +2
Query: 248 VISRQLLTDVSTHLALLADNVSQEVSHF---ALDVIQPRVISFEEQVASIRQHLADIYER 418
+ +L++ + L +++ + H AL+ + + +ASIR HLA + R
Sbjct: 40 IYPEELISQYTRELGFSKPTIAEALEHLRTHALEKLSAKKRFQASGLASIRVHLAGQHSR 99
Query: 419 NQNWKEAANVLVGIPLETG-QKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQ 595
N E + L G L ++++D + L L+ D P+ ++ N + +L
Sbjct: 100 KMN-MEISLKLTGAELRKRLGDEFTMD-PVRLKLICNGQVLKEDSPLDSQTVTNNSQILA 157
Query: 596 AETTNEQLQIYYKVC----YARVLDYRRKFIEA 682
+ +++ K+ A LD+ RK EA
Sbjct: 158 IALSETEVEARKKLLKDEHAASSLDWTRKAAEA 190
>SB_48626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/138 (19%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Frame = +2
Query: 95 LSELRNSGGLHKDQAEKYRNVLMEILKST-EQELSESLKAFIEAIVNEN-VSLVISRQLL 268
L +L + G + K + + ++ ++KS+ + L K I+ +V ++ L ++ ++L
Sbjct: 9 LHKLESQGIIEKMVHSDWASSIVPVVKSSGDIRLCGDYKVTIKKVVKQDRYPLPLTDEIL 68
Query: 269 TDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWKEAANV 448
+++ ++SQ LD + + V R +ER Q+ E +
Sbjct: 69 ANLANGEKFTKLHLSQAYHQIPLDEASQNLTTINTHVGQFRYKRLTRFERRQDDAERLSK 128
Query: 449 LVGIPLETGQKQYSVDYK 502
L G+ S DY+
Sbjct: 129 LQGVLTRLQAWLASADYE 146
>SB_34340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.7 bits (61), Expect = 4.8
Identities = 31/118 (26%), Positives = 54/118 (45%)
Frame = -3
Query: 624 ICSCSLVVSACSNEALLTNASACTGSSTSRYSLAIFRYVSSL*STEYCFCPVSNGIPTKT 445
+CS VVS+ A +SA S+ +Y ++ +YV S S +Y C + +
Sbjct: 82 VCSAQCVVSS----AQYVVSSAQYVVSSVQYVVSSAQYVVS--SAQYVVCSAQCVVSSAQ 135
Query: 444 LAASFQF*FRS*ISAKCCLILATCSSNEITLGCITSSAKWETSCETLSASSAKCVLTS 271
S SA+C ++++ + C+ SSA++ S SSA+CV++S
Sbjct: 136 YVVS---------SAQC--VVSSAQYVVSSAQCVVSSAQYVVSSAQCVVSSAQCVVSS 182
>SB_51928| Best HMM Match : HEAT (HMM E-Value=4.9e-22)
Length = 1115
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/100 (20%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +2
Query: 128 KDQAEKYRNVLMEILKSTEQEL-SESLKAFIEAIVNENVSLVISRQLLTDV--STHLALL 298
KD+ E+YR ++ME ++ +L S + + +E + + + Q D+ +
Sbjct: 711 KDENEQYRKMVMETIEKIMGQLGSADIDSRLEEQLIDGILYAFQEQTQEDIVMLNGFGTV 770
Query: 299 ADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYER 418
+ +S+ V + + + + A +RQ AD+ R
Sbjct: 771 VNALSKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISR 810
>SB_48189| Best HMM Match : K-box (HMM E-Value=0.34)
Length = 190
Score = 28.7 bits (61), Expect = 4.8
Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 4/192 (2%)
Frame = +2
Query: 53 EIKMPVNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSE---SL-KAFIE 220
E+K V L+ Q S S +A+ + LK ++ L+E SL K +
Sbjct: 3 EVKSRVLLEESLQQASTSWESAEAALTEAKAILEKELVSLKESQALLNEDNASLNKELVA 62
Query: 221 AIVNENVSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHL 400
E + ++++L +S +L + + +E S ++ EE++A + Q +
Sbjct: 63 MCEKEKYIISVNKELEAQIS-NLKMREEEEKREASR--------QIADLEEKLAGMVQEI 113
Query: 401 ADIYERNQNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNR 580
+ + W+E ANV V + G++ + T ++ + LE E
Sbjct: 114 GRLESNIKGWEEEANVWVEEKAQIGKEVACLKDAFSTEMQTEKQSLEAKHSRDIEGMTKI 173
Query: 581 ASLLQAETTNEQ 616
L+A+ +++
Sbjct: 174 NEELKAKLCSQK 185
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 71 NLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKA 211
++Q++++ SELR L K++ + R +I K TE++L+ KA
Sbjct: 75 SMQTIKELQSELRRFEELCKERQHQLRESSSKIEKLTEEKLTAENKA 121
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.3 bits (60), Expect = 6.3
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Frame = +2
Query: 107 RNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTH 286
+ +G + E+Y L I + E S++ + ++N+N L +LL V+T
Sbjct: 1226 KEAGAKRQKLKEEYEGKLRVIYEELVSERSKN-----KELMNQNNQLSQKVKLLEGVTTK 1280
Query: 287 LALLADNVSQ---------EVSHFALDVIQPRVI-SFEEQVASIRQHLADIYERNQNWKE 436
+ V Q S + + P+VI S+E+++ ++ + ++++ +RN N ++
Sbjct: 1281 QKKDIERVKQMEEKLKELERQSKQSEETDNPKVIESYEDKIKALEKEISNLKDRNNNGEK 1340
Query: 437 AANVLVGIP-LETGQKQYSVD 496
+L + LE K+ SV+
Sbjct: 1341 VQELLHKVTYLEGELKERSVE 1361
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = +2
Query: 122 LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTHLALLA 301
L K EKY + E+ ++ E+E E A ++ + ++ S ++ L D L + A
Sbjct: 172 LEKQFLEKYTKEIEELKQALEEEKEEFTVATLDDLAQKHASEMMR---LRDELNQLMVQA 228
Query: 302 DNVSQEV--SHFA-LDVIQPRVISFEEQVASIRQHLADIYERNQNWKEAANVLVGIPLET 472
D ++ SH A ++ + ++ +++ S+R L + N + +E A+ L + E
Sbjct: 229 DEAKNQMRQSHMAEIEEMNRKMAREYQKIESLRADLEGAH--NSSAQEHAHQLQELRDEM 286
Query: 473 GQKQYSV 493
Q++ ++
Sbjct: 287 EQQRVTL 293
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.3 bits (60), Expect = 6.3
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Frame = +2
Query: 74 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTE--QELSESLKAFIEAIVNENVSL 247
LQ+VRQ + EL + EKY++ + + Q + + E + +N L
Sbjct: 4171 LQAVRQKIVELERNNASLSASLEKYQSDFNHTRQERDKYQTANYTYNREKEELAQQNAEL 4230
Query: 248 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVIS----FEEQVASIRQHLADIYE 415
+ ++ + L ++S+++S L V Q + S + V ++Q D+
Sbjct: 4231 KMKLEVKVNECEELERTTSDLSKKLSQAELIVQQLSIESDAPAAQTLVQQLQQEKDDLKS 4290
Query: 416 RNQNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQ 595
+ K+ E Q++ KL++ + + LE+ + + E++ +R S LQ
Sbjct: 4291 KLDQLKKTLQKSEANAEEALQRRTDELEKLQSQTRSLQSQLELIEK-EKESWESRESELQ 4349
Query: 596 AETTNEQ 616
E + Q
Sbjct: 4350 EELQHLQ 4356
>SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1846
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3
Query: 363 EITLGCITSSAKWETSCETLSASSAKCVLTSVKSCLEITRLTFSLTIASMNAF 205
+IT+GC+ + A W LS S+A V T S + ++ I++M +F
Sbjct: 1101 KITVGCLPAGATWIAWLICLSGSAASSVFTVFYSLVWGAEISNQWLISTMVSF 1153
>SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8)
Length = 342
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/87 (24%), Positives = 40/87 (45%)
Frame = +2
Query: 167 ILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVI 346
IL + S L+ I+A + + L+++ + LTD+ T LL + E++ LD +
Sbjct: 224 ILSYVTSDNSSQLQVVIKA--DGKLELMVNWKTLTDIGTVTRLLHFVLHFEITWHYLDPV 281
Query: 347 QPRVISFEEQVASIRQHLADIYERNQN 427
SFE +R ++ +R +
Sbjct: 282 PTYPFSFENATFLLRIRVSSTLKRKND 308
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 479 KQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQ 622
K ++ +LE Y K + L + ++ V ASL+QAE T ++LQ
Sbjct: 11 KVKNMQQELEQYKKELQESLSISTVMEQTLQVKEASLIQAEETLKELQ 58
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 53 EIKMPVNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVN 232
+IK + + + + + G H D+ +N EIL +T +L E+LK I+ I N
Sbjct: 1052 KIKAGLKTKEEMEKVGNSLQATGKHIDRIITLQN---EILDATNPKLREALKKKIDKIKN 1108
Query: 233 EN 238
EN
Sbjct: 1109 EN 1110
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 27.9 bits (59), Expect = 8.4
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 239 VSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQ-----VASIRQHLA 403
V V++R TD+ +HLA + VS + +D Q +I F +Q +AS+ HLA
Sbjct: 511 VGEVLARAYSTDLDSHLAFVELLVSMQ----KIDEAQAMLIRFIQQNPGEFLASV--HLA 564
Query: 404 DIYERNQNWKEAANVLVGIPLETGQKQYS 490
+ RN N A + L + GQ++ S
Sbjct: 565 MLRMRNGNICYALDELTTLLRTVGQEKLS 593
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,092,887
Number of Sequences: 59808
Number of extensions: 429657
Number of successful extensions: 1185
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -