Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0033
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p pro... 292 3e-79
AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA ... 292 3e-79
AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9 signalo... 289 2e-78
AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p pro... 30 2.6
AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA... 30 2.6
AY071292-1|AAL48914.1| 513|Drosophila melanogaster RE32485p pro... 30 3.5
AY069196-1|AAL39341.1| 397|Drosophila melanogaster GH25458p pro... 30 3.5
AE014296-3379|AAN12133.1| 513|Drosophila melanogaster CG5130-PB... 30 3.5
AE014296-3378|AAF51612.1| 513|Drosophila melanogaster CG5130-PA... 30 3.5
AE014296-875|AAF47921.3| 397|Drosophila melanogaster CG32245-PA... 30 3.5
AY118742-1|AAM50602.1| 448|Drosophila melanogaster GH05665p pro... 29 6.1
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 29 6.1
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 29 6.1
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 29 6.1
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 29 6.1
AE014297-928|AAN13423.1| 448|Drosophila melanogaster CG9356-PB,... 29 6.1
AE014297-927|AAF54371.1| 448|Drosophila melanogaster CG9356-PA,... 29 6.1
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 29 8.0
AY113286-1|AAM29291.1| 608|Drosophila melanogaster AT20169p pro... 29 8.0
AE014297-3437|AAF56221.1| 608|Drosophila melanogaster CG5933-PA... 29 8.0
>BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p
protein.
Length = 407
Score = 292 bits (716), Expect = 3e-79
Identities = 142/210 (67%), Positives = 172/210 (81%)
Frame = +2
Query: 68 VNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSL 247
++ ++R L L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSL
Sbjct: 7 ISTAALRSQLMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSL 66
Query: 248 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
VISRQ+L DV + L+ L D++S+ +SHF L+ + PRVISFEEQVA IR HLA+IYERNQ
Sbjct: 67 VISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQ 126
Query: 428 WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETT 607
W++AA VLVGIPLETGQKQYSV+ KL TYLKIARLYLE +D VQAE F+NRASLLQAET
Sbjct: 127 WRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETN 186
Query: 608 NEQLQIYYKVCYARVLDYRRKFIEAAQRYN 697
+E+LQ+ YKVCYARVLDYRRKFIEAAQRYN
Sbjct: 187 SEELQVLYKVCYARVLDYRRKFIEAAQRYN 216
>AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA
protein.
Length = 407
Score = 292 bits (716), Expect = 3e-79
Identities = 142/210 (67%), Positives = 172/210 (81%)
Frame = +2
Query: 68 VNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSL 247
++ ++R L L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSL
Sbjct: 7 ISTAALRSQLMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSL 66
Query: 248 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
VISRQ+L DV + L+ L D++S+ +SHF L+ + PRVISFEEQVA IR HLA+IYERNQ
Sbjct: 67 VISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQ 126
Query: 428 WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETT 607
W++AA VLVGIPLETGQKQYSV+ KL TYLKIARLYLE +D VQAE F+NRASLLQAET
Sbjct: 127 WRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETN 186
Query: 608 NEQLQIYYKVCYARVLDYRRKFIEAAQRYN 697
+E+LQ+ YKVCYARVLDYRRKFIEAAQRYN
Sbjct: 187 SEELQVLYKVCYARVLDYRRKFIEAAQRYN 216
>AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9
signalosome subunit 4 CSN4 protein.
Length = 407
Score = 289 bits (710), Expect = 2e-78
Identities = 141/210 (67%), Positives = 171/210 (81%)
Frame = +2
Query: 68 VNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSL 247
++ ++R L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSL
Sbjct: 7 ISTAALRSQQMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSL 66
Query: 248 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
VISRQ+L DV + L+ L D++S+ +SHF L+ + PRVISFEEQVA IR HLA+IYERNQ
Sbjct: 67 VISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQ 126
Query: 428 WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETT 607
W++AA VLVGIPLETGQKQYSV+ KL TYLKIARLYLE +D VQAE F+NRASLLQAET
Sbjct: 127 WRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETN 186
Query: 608 NEQLQIYYKVCYARVLDYRRKFIEAAQRYN 697
+E+LQ+ YKVCYARVLDYRRKFIEAAQRYN
Sbjct: 187 SEELQVLYKVCYARVLDYRRKFIEAAQRYN 216
>AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p
protein.
Length = 1099
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 512 YLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRK 670
Y+ A Y ++ AEA N A +A++T+E + K YAR L Y+R+
Sbjct: 135 YIGWAAYYESREEYKDAEAVFNLAFQEKAQSTSELQHAHTKFAYARSLFYQRQ 187
>AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA
protein.
Length = 1099
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 512 YLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRK 670
Y+ A Y ++ AEA N A +A++T+E + K YAR L Y+R+
Sbjct: 135 YIGWAAYYESREEYKDAEAVFNLAFQEKAQSTSELQHAHTKFAYARSLFYQRQ 187
>AY071292-1|AAL48914.1| 513|Drosophila melanogaster RE32485p
protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 282 HT*HCWLIMFHRRFPTLHLMLYNPELF 362
H H W + HR T+H+ NP+L+
Sbjct: 333 HDLHIWQLAAHRYVATIHIQFQNPKLY 359
>AY069196-1|AAL39341.1| 397|Drosophila melanogaster GH25458p
protein.
Length = 397
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VRQYLSELRNSGG-LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 253
+ Q S + N GG + + ++YRN +M+I + ++E+S+ + ++ +V+LVI
Sbjct: 22 MEQVSSMVSNGGGSVAMQRDDEYRNRIMKIRRLADEEISDKASTCGKLLIFLSVALVI 79
>AE014296-3379|AAN12133.1| 513|Drosophila melanogaster CG5130-PB,
isoform B protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 282 HT*HCWLIMFHRRFPTLHLMLYNPELF 362
H H W + HR T+H+ NP+L+
Sbjct: 333 HDLHIWQLAAHRYVATIHIQFQNPKLY 359
>AE014296-3378|AAF51612.1| 513|Drosophila melanogaster CG5130-PA,
isoform A protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 282 HT*HCWLIMFHRRFPTLHLMLYNPELF 362
H H W + HR T+H+ NP+L+
Sbjct: 333 HDLHIWQLAAHRYVATIHIQFQNPKLY 359
>AE014296-875|AAF47921.3| 397|Drosophila melanogaster CG32245-PA,
isoform A protein.
Length = 397
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VRQYLSELRNSGG-LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 253
+ Q S + N GG + + ++YRN +M+I + ++E+S+ + ++ +V+LVI
Sbjct: 22 MEQVSSMVSNGGGSVAMQRDDEYRNRIMKIRRLADEEISDKASTCGKLLIFLSVALVI 79
>AY118742-1|AAM50602.1| 448|Drosophila melanogaster GH05665p
protein.
Length = 448
Score = 29.1 bits (62), Expect = 6.1
Identities = 31/165 (18%), Positives = 71/165 (43%)
Frame = +2
Query: 74 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 253
+ S+++ L+++R+ + Q + V E+ + E L+ + + + + L
Sbjct: 199 VNSLKEELAKMRDERNYFQAQYKFQTQVNSELKSLLVASVGEDLQTRVNLLTEDKLQL-- 256
Query: 254 SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWK 433
+R LL D + +L + + E +V + + ++ V + + AD+ ++NQ
Sbjct: 257 ARALL-DTANNLTTHTEQI--EFLAGQCEVWRSKFLASSVMVEELARWKADLTQKNQLLN 313
Query: 434 EAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEA 568
E+ L+ + + Q + +L+ KI L L D + A
Sbjct: 314 ESTKQLLHATHQIREIQLDMLKQLKFLAKIRFLNLPATDVISLSA 358
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 128 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 301
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 302 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 128 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 301
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 302 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 128 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 301
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 302 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 128 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 301
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 302 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 427
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AE014297-928|AAN13423.1| 448|Drosophila melanogaster CG9356-PB,
isoform B protein.
Length = 448
Score = 29.1 bits (62), Expect = 6.1
Identities = 31/165 (18%), Positives = 71/165 (43%)
Frame = +2
Query: 74 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 253
+ S+++ L+++R+ + Q + V E+ + E L+ + + + + L
Sbjct: 199 VNSLKEELAKMRDERNYFQAQYKFQTQVNSELKSLLVASVGEDLQTRVNLLTEDKLQL-- 256
Query: 254 SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWK 433
+R LL D + +L + + E +V + + ++ V + + AD+ ++NQ
Sbjct: 257 ARALL-DTANNLTTHTEQI--EFLAGQCEVWRSKFLASSVMVEELARWKADLTQKNQLLN 313
Query: 434 EAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEA 568
E+ L+ + + Q + +L+ KI L L D + A
Sbjct: 314 ESTKQLLHATHQIREIQLDMLKQLKFLAKIRFLNLPATDVISLSA 358
>AE014297-927|AAF54371.1| 448|Drosophila melanogaster CG9356-PA,
isoform A protein.
Length = 448
Score = 29.1 bits (62), Expect = 6.1
Identities = 31/165 (18%), Positives = 71/165 (43%)
Frame = +2
Query: 74 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 253
+ S+++ L+++R+ + Q + V E+ + E L+ + + + + L
Sbjct: 199 VNSLKEELAKMRDERNYFQAQYKFQTQVNSELKSLLVASVGEDLQTRVNLLTEDKLQL-- 256
Query: 254 SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWK 433
+R LL D + +L + + E +V + + ++ V + + AD+ ++NQ
Sbjct: 257 ARALL-DTANNLTTHTEQI--EFLAGQCEVWRSKFLASSVMVEELARWKADLTQKNQLLN 313
Query: 434 EAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEA 568
E+ L+ + + Q + +L+ KI L L D + A
Sbjct: 314 ESTKQLLHATHQIREIQLDMLKQLKFLAKIRFLNLPATDVISLSA 358
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 28.7 bits (61), Expect = 8.0
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = -3
Query: 321 TSCETLSASSAKCVLTSVK-------SCLEITRLTFSLTIASMNAFNDSDNSCSVLFSIS 163
TS +TLS ++AK VL K +CL +TR+T+ L+IA+ + + S+L
Sbjct: 153 TSVDTLSPNTAKAVLELQKRCRADKLACLSLTRVTY-LSIANDLQEVEEPDRASILHDTD 211
Query: 162 IRTLRYFSA*SLCKPPEFLNSLKYWRTLCKLTG 64
+ A S P E L +L+ + L ++ G
Sbjct: 212 LLVAPNSPAES--SPDEELMALQLGKKLAQVLG 242
>AY113286-1|AAM29291.1| 608|Drosophila melanogaster AT20169p
protein.
Length = 608
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/84 (19%), Positives = 43/84 (51%)
Frame = +2
Query: 95 LSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTD 274
+ L+ +++ EK + +EIL +++L+ K +EA + ++ Q L+
Sbjct: 7 IKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEADLEVQKEVL---QALSS 63
Query: 275 VSTHLALLADNVSQEVSHFALDVI 346
S L +++ V ++++ +L+++
Sbjct: 64 CSLALPIVSTQVVEKIAGSSLEMV 87
>AE014297-3437|AAF56221.1| 608|Drosophila melanogaster CG5933-PA
protein.
Length = 608
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/84 (19%), Positives = 43/84 (51%)
Frame = +2
Query: 95 LSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQLLTD 274
+ L+ +++ EK + +EIL +++L+ K +EA + ++ Q L+
Sbjct: 7 IKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEADLEVQKEVL---QALSS 63
Query: 275 VSTHLALLADNVSQEVSHFALDVI 346
S L +++ V ++++ +L+++
Sbjct: 64 CSLALPIVSTQVVEKIAGSSLEMV 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,363,008
Number of Sequences: 53049
Number of extensions: 616263
Number of successful extensions: 1713
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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