Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0030
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical pr... 32 0.30
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 29 2.1
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 28 4.9
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 28 4.9
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 27 6.5
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 27 6.5
>Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical
protein F22G12.6 protein.
Length = 276
Score = 31.9 bits (69), Expect = 0.30
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 479 YRRPWTSAMPGAEPSRCLPLNT--LHKPRLKKDMS*RSGNTVEGSSFHSRMVRGKKDLWK 306
Y +S+ P + PSR L L + L KPR +GN+++ H ++ + D WK
Sbjct: 33 YELECSSSTPDSFPSRLLSLTSSLLEKPRFSDVTFKFAGNSLKSVPAHKYVLAARTDFWK 92
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 29.1 bits (62), Expect = 2.1
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Frame = +2
Query: 131 WVCGGTSVPSVFYTVCSMGSA-LRNCSR*YQHLVFTIAPAATGVEFIHTTWSHCGHPQCV 307
+ C T+ P+ V M SA L+NC+R T V+F T S + QC
Sbjct: 76 FACYTTATPTPAPVVPDMRSAALKNCARTCGLCCKTSDFDCPNVQFPRLTCSTITNEQCR 135
Query: 308 S---RDLFC-HVPSGYGMSSPPRCFPSAMTCPSSNEACG 412
S R + PS G + C M C + CG
Sbjct: 136 SSVWRTIIATDCPSACGFCNQGGCVDGVMDCANDLSICG 174
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 293 HPQCVSRDLFCHVPSGYGMSSPPRCFPSAMT 385
HPQ V++ + HVP G +PP+ P+ T
Sbjct: 162 HPQIVNQPMHPHVPVGSQNYNPPQFVPAPPT 192
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 515 ADGHTAHLMVSGYRRPWTSAMPGAEPS 435
ADGHT HL++ RP T A A P+
Sbjct: 69 ADGHTVHLVIRNQARP-TPAPAAATPT 94
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 278 WSHCGHPQCVSRDLFCH 328
WS C HP CV+ +F H
Sbjct: 12 WSRCVHPSCVAWVIFIH 28
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical protein
F57F5.2 protein.
Length = 945
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 473 RPWTSAMPGAEPSRCLPLNTLHKPRLKKDMS*RSGNTVEGSSFHSRMVRGKKD 315
R SA P R L L K + + M+ G++V SS HS +R KKD
Sbjct: 871 RTTVSAKP-TTTRRLLNQKDLEKEKKRSSMA---GSSVTSSSAHSHSIRSKKD 919
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical protein
F57F5.2 protein.
Length = 945
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 473 RPWTSAMPGAEPSRCLPLNTLHKPRLKKDMS*RSGNTVEGSSFHSRMVRGKKD 315
R SA P R L L K + + M+ G++V SS HS +R KKD
Sbjct: 871 RTTVSAKP-TTTRRLLNQKDLEKEKKRSSMA---GSSVTSSSAHSHSIRSKKD 919
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 473 RPWTSAMPGAEPSRCLPLNTLHKPRLKKDMS*RSGNTVEGSSFHSRMVRGKKD 315
R SA P R L L K + + M+ G++V SS HS +R KKD
Sbjct: 871 RTTVSAKP-TTTRRLLNQKDLEKEKKRSSMA---GSSVTSSSAHSHSIRSKKD 919
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,040,874
Number of Sequences: 27780
Number of extensions: 328815
Number of successful extensions: 874
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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