BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0029
(676 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146742-1|AAO12102.1| 154|Anopheles gambiae odorant-binding pr... 26 0.95
AF437890-1|AAL84185.1| 154|Anopheles gambiae odorant binding pr... 26 0.95
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 2.2
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 25 2.2
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 25 2.9
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 24 5.0
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 8.8
>AY146742-1|AAO12102.1| 154|Anopheles gambiae odorant-binding
protein AgamOBP7 protein.
Length = 154
Score = 26.2 bits (55), Expect = 0.95
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 53 DSKNSEVVKKEIDAVLPTDVKVTTEHITKE--QIVSP 157
D ++ + ++P DVK +H+T+E IV+P
Sbjct: 88 DEATGRILLDRLLYIIPDDVKAAVDHLTRECSHIVTP 124
>AF437890-1|AAL84185.1| 154|Anopheles gambiae odorant binding
protein protein.
Length = 154
Score = 26.2 bits (55), Expect = 0.95
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 53 DSKNSEVVKKEIDAVLPTDVKVTTEHITKE--QIVSP 157
D ++ + ++P DVK +H+T+E IV+P
Sbjct: 88 DEATGRILLDRLLYIIPDDVKAAVDHLTRECSHIVTP 124
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 320 TDSSSLSHYVDLPKSPLADSPKPTEE 397
TDS S PK+P ADS KP E
Sbjct: 1334 TDSPLFSRRNRQPKAPDADSSKPQSE 1359
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 25.0 bits (52), Expect = 2.2
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 14 KPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKA 193
KP+ +D Q E+ + + V P D EH+ +EQ ++E E+++
Sbjct: 42 KPEAPVDDAEQPLPPNGDELPEDAPEPV-PEDGSPDEEHLEEEQEEEAEADEEEADESES 100
Query: 194 EE 199
EE
Sbjct: 101 EE 102
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 24.6 bits (51), Expect = 2.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 115 SNYRTHYKRTNCIS 156
SN R+HYKR C S
Sbjct: 170 SNQRSHYKRIQCYS 183
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 323 DSSSLSHYVDLPKSPLADSPKPTEELLE 406
D ++ LP P ADS KPT++ ++
Sbjct: 27 DEENVVQAEQLPILPTADSSKPTDDTVK 54
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 17 PKVQLDLTVQEFDSKNSEVV 76
P V DLTV+E+ K +E+V
Sbjct: 91 PPVGSDLTVEEYKRKWTEIV 110
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,475
Number of Sequences: 2352
Number of extensions: 7516
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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