Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0029
(676 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052038-1|AAK93462.1| 612|Drosophila melanogaster LP04345p pro... 31 1.4
AE014297-1563|AAF54845.1| 612|Drosophila melanogaster CG6234-PA... 31 1.4
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P... 30 3.3
AY113368-1|AAM29373.1| 789|Drosophila melanogaster LD32039p pro... 29 4.4
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei... 29 4.4
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 29 4.4
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB... 29 4.4
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA... 29 4.4
>AY052038-1|AAK93462.1| 612|Drosophila melanogaster LP04345p
protein.
Length = 612
Score = 31.1 bits (67), Expect = 1.4
Identities = 37/123 (30%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +2
Query: 65 SEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKAEEPVXXXXXXXXXXXXX 244
+E K ++ DV V EH+ KEQ V V E +R + EEP+
Sbjct: 399 TEAAKIVVEEEPKEDVSVQQEHL-KEQRVQTVSES-NRQASPTEEPIKEVIFPKGDDESP 456
Query: 245 XXXXGSDSIEISQEQRTDTEKSIADTDSSSLSH--YVDLPKSPLADSPKPTEELLEKPVE 418
S+S E TE++I D DSS + VD KS DS L+ P
Sbjct: 457 VEGDSSESDE------KPTERAIVDDDSSEEQNEDVVDEGKSSSDDS--TATPLVSYPPH 508
Query: 419 DTG 427
D G
Sbjct: 509 DAG 511
>AE014297-1563|AAF54845.1| 612|Drosophila melanogaster CG6234-PA
protein.
Length = 612
Score = 31.1 bits (67), Expect = 1.4
Identities = 37/123 (30%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +2
Query: 65 SEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKAEEPVXXXXXXXXXXXXX 244
+E K ++ DV V EH+ KEQ V V E +R + EEP+
Sbjct: 399 TEAAKIVVEEEPKEDVSVQQEHL-KEQRVQTVSES-NRQASPTEEPIKEVIFPKGDDESP 456
Query: 245 XXXXGSDSIEISQEQRTDTEKSIADTDSSSLSH--YVDLPKSPLADSPKPTEELLEKPVE 418
S+S E TE++I D DSS + VD KS DS L+ P
Sbjct: 457 VEGDSSESDE------KPTERAIVDDDSSEEQNEDVVDEGKSSSDDS--TATPLVSYPPH 508
Query: 419 DTG 427
D G
Sbjct: 509 DAG 511
>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
protein.
Length = 9196
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGSV 433
D+ KS+ +TD S Y D D PKP ++ + P SV
Sbjct: 6308 DSSKSVVETDKPSPKEYSDDETDDEIDIPKPLDKPISHPTSLVTSV 6353
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGSV 433
D+ KS+ +TD S Y D D PKP ++ + P SV
Sbjct: 5074 DSSKSVVETDKPSPKEYSDDETDGEIDFPKPLDKPISHPTSLVTSV 5119
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGSV 433
D+ KS+ +TD S Y D D PKP ++ + P SV
Sbjct: 5378 DSSKSVVETDKPSPKEYSDDETDGEIDFPKPLDKPISHPTSLVTSV 5423
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKP 412
D+ KS+ +TD S Y D D PKP ++ + P
Sbjct: 6688 DSSKSVVETDKPSPKEYSDDETDDEIDFPKPLDKPISHP 6726
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKP 412
D+ KS+ +TD S Y D D PKP ++ + P
Sbjct: 7828 DSSKSVVETDKPSPKEYSDDETDDEIDFPKPLDKPMSHP 7866
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKP 412
D+ KS+ TD S+ Y D D PKP ++ + P
Sbjct: 5834 DSSKSVVKTDKSTPKEYSDDETDDEIDFPKPLDKPISHP 5872
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 296 DTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKP 412
D+ KS+ TD S+ Y D D PKP ++ + P
Sbjct: 7068 DSSKSVVKTDKSTPKEYSDDETDDEIDFPKPLDKPISHP 7106
>AY113368-1|AAM29373.1| 789|Drosophila melanogaster LD32039p
protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 5 TEVKPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHI---TKEQIVSPVIEKES 175
+EVK + + + + D K V++ P+D +V TE KE+ P +++E
Sbjct: 397 SEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEP 456
Query: 176 RIENKAEEPV 205
+ E K +E V
Sbjct: 457 KTEEKEKEKV 466
>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
protein.
Length = 1982
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 5 TEVKPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHI---TKEQIVSPVIEKES 175
+EVK + + + + D K V++ P+D +V TE KE+ P +++E
Sbjct: 1590 SEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEP 1649
Query: 176 RIENKAEEPV 205
+ E K +E V
Sbjct: 1650 KTEEKEKEKV 1659
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 5 TEVKPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHI---TKEQIVSPVIEKES 175
+EVK + + + + D K V++ P+D +V TE KE+ P +++E
Sbjct: 1126 SEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEP 1185
Query: 176 RIENKAEEPV 205
+ E K +E V
Sbjct: 1186 KTEEKEKEKV 1195
>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
isoform B protein.
Length = 1983
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 5 TEVKPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHI---TKEQIVSPVIEKES 175
+EVK + + + + D K V++ P+D +V TE KE+ P +++E
Sbjct: 1591 SEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEP 1650
Query: 176 RIENKAEEPV 205
+ E K +E V
Sbjct: 1651 KTEEKEKEKV 1660
>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
isoform A protein.
Length = 1982
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 5 TEVKPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHI---TKEQIVSPVIEKES 175
+EVK + + + + D K V++ P+D +V TE KE+ P +++E
Sbjct: 1590 SEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEP 1649
Query: 176 RIENKAEEPV 205
+ E K +E V
Sbjct: 1650 KTEEKEKEKV 1659
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,508,518
Number of Sequences: 53049
Number of extensions: 332383
Number of successful extensions: 1269
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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