Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0029
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 28 5.3
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 28 7.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z66515-13|CAA91355.1| 184|Caenorhabditis elegans Hypothetical p... 27 9.2
Z48638-11|CAA88572.1| 184|Caenorhabditis elegans Hypothetical p... 27 9.2
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 9.2
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 9.2
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 44 QEFDSKNSEVV-KKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESR-IENKAEEPV 205
Q+ D K S+V KKE D+ P +++ K+ EKE + ENK +E +
Sbjct: 898 QKDDVKVSQVTTKKEEDSTQPAPTLTVKKNVVKQTAEKSTSEKEHKTTENKEQERI 953
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GSDSIEISQEQRTDTEKSIADTDSSSLSHYVDLPKSPLADSP-KPTEELLEKPVEDTG 427
GS S Q++ + E+ A++ SS + D + P KPTEE +K ++TG
Sbjct: 551 GSQSNPEPQDEEENAEQQSANSSQSSAAEEEDDEHVVPENEPVKPTEEFAKKSPKNTG 608
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.9 bits (59), Expect = 7.0
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
Frame = +2
Query: 53 DSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKAEEPVXXXXXXXXX 232
DS++ + ++E D + T + +T +T VSPV E + K +
Sbjct: 1719 DSRDEVLHRREEDPEVHTPEESSTAVVTDVPSVSPVTEN---VPEKQTDDFDFTYSDSRF 1775
Query: 233 XXXXXXXXGSDSIEISQEQRTDTE----KSIADTDSSSLSHYVDLPKSPLA------DSP 382
++ + Q+Q+ D + +++ D D S L H + P D P
Sbjct: 1776 AEIVQMQEEEEAGSL-QKQKVDEKPRMWETVFDGDESELPHQDFVFNEPTTKKTSDFDFP 1834
Query: 383 KPTEELLEKPVE 418
K T+E+ EKP E
Sbjct: 1835 KETDEVFEKPSE 1846
>AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical
protein B0511.11 protein.
Length = 368
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 47 EFDSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSP 157
EF+ S+V +KEI + P +KV +H E+ ++P
Sbjct: 146 EFEKMTSDVDEKEILKLAPRLLKVAKKHAAIEKCLTP 182
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 53 DSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKAEEP 202
+ K EV KKE D D + E KE+ +EK+ E K EEP
Sbjct: 297 EEKKEEVEKKEEDE--KKDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEP 344
>Z66515-13|CAA91355.1| 184|Caenorhabditis elegans Hypothetical
protein R53.8 protein.
Length = 184
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Frame = +2
Query: 158 VIEKESRI-----ENKAEEPVXXXXXXXXXXXXXXXXXGSDSIEISQEQRTDTEKSIADT 322
V EKES+I + + ++PV + E + +Q+ D EK D
Sbjct: 89 VFEKESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDG 148
Query: 323 DSSSLSHYVDLPKSPLADSPKPTEELLEKPVE 418
D + PK D PK ++ K E
Sbjct: 149 DKKDKEKVSEKPKEQPEDQPKDVPKVENKDKE 180
>Z48638-11|CAA88572.1| 184|Caenorhabditis elegans Hypothetical
protein R53.8 protein.
Length = 184
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Frame = +2
Query: 158 VIEKESRI-----ENKAEEPVXXXXXXXXXXXXXXXXXGSDSIEISQEQRTDTEKSIADT 322
V EKES+I + + ++PV + E + +Q+ D EK D
Sbjct: 89 VFEKESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDG 148
Query: 323 DSSSLSHYVDLPKSPLADSPKPTEELLEKPVE 418
D + PK D PK ++ K E
Sbjct: 149 DKKDKEKVSEKPKEQPEDQPKDVPKVENKDKE 180
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 287 QRTDTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGS 430
++++ S T S+S + +V P++ + K ++ +PV DTGS
Sbjct: 733 KKSEISPSKPSTSSASSTSFVQQASWPISQNKKNLKKNSNQPVADTGS 780
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 287 QRTDTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGS 430
++++ S T S+S + +V P++ + K ++ +PV DTGS
Sbjct: 733 KKSEISPSKPSTSSASSTSFVQQASWPISQNKKNLKKNSNQPVADTGS 780
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,839,462
Number of Sequences: 27780
Number of extensions: 178956
Number of successful extensions: 826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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