Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0028
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.2  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   5.2  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   6.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 582  RHIES-HSVGRALTRRSDDLLHVSQDRLWWRG 490
            RH+   H+   A++R  +    V +D+LWW G
Sbjct: 1160 RHVPGIHNPADAVSRGRNPA-EVVEDKLWWHG 1190


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = -1

Query: 138 PIDIYNVNTPPTLRYKF*GLKYSYNGCPTFQTETHYCFTAGIGRV 4
           P D YNVN   T   +   L+ +   C     E+  C+    G +
Sbjct: 102 PADAYNVNRTETCLQELPALELNAEKCCGLAFESFLCYYYNYGNL 146


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 180 GRAHSPPGVDWLLKPIDIYNVNTPPTLRYKF*GLKYSYNGCP-TFQTETH 34
           G  H P   +    P+++Y V      R++F  +  + + CP   Q E H
Sbjct: 257 GTYHDPKKNETTQTPLEVYTVRRGARFRFRF--INAASHVCPLQLQIEDH 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,097
Number of Sequences: 2352
Number of extensions: 13613
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)