Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0028
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-P...    31   2.0  
BT015250-1|AAT94479.1| 1246|Drosophila melanogaster LP19005p pro...    29   6.0  
AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.     29   6.0  
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ...    29   6.0  
AE014296-72|AAF47370.1|  409|Drosophila melanogaster CG12313-PA ...    29   6.0  
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA...    29   6.0  

>AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-PA
           protein.
          Length = 266

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 156 VDWLLKPIDIYNVNTPPTLRYK 91
           +DW+L  +D Y V +PP ++Y+
Sbjct: 239 IDWILMVVDNYTVRSPPKIQYR 260


>BT015250-1|AAT94479.1| 1246|Drosophila melanogaster LP19005p protein.
          Length = 1246

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 7/38 (18%), Positives = 24/38 (63%)
 Frame = -1

Query: 348  GLELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGK 235
            G ++++ + +S   + + W++WN+ ++ + H +T + +
Sbjct: 909  GSDMDEPYAVSLYQDYVYWSDWNTGDIERVHKTTGQNR 946


>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
          Length = 1678

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 7/38 (18%), Positives = 24/38 (63%)
 Frame = -1

Query: 348  GLELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGK 235
            G ++++ + +S   + + W++WN+ ++ + H +T + +
Sbjct: 909  GSDMDEPYAVSLYQDYVYWSDWNTGDIERVHKTTGQNR 946


>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
            protein LRP6 protein.
          Length = 1678

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 7/38 (18%), Positives = 24/38 (63%)
 Frame = -1

Query: 348  GLELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGK 235
            G ++++ + +S   + + W++WN+ ++ + H +T + +
Sbjct: 909  GSDMDEPYAVSLYQDYVYWSDWNTGDIERVHKTTGQNR 946


>AE014296-72|AAF47370.1|  409|Drosophila melanogaster CG12313-PA
           protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 348 GLELNDAFKISSQNEQLAWAEWNSSNLYQK 259
           G E+ D F    Q +QL W  W S N +Q+
Sbjct: 157 GNEVIDEFSCLPQMQQLMWRTWKSVNRFQR 186


>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
            protein.
          Length = 1678

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 7/38 (18%), Positives = 24/38 (63%)
 Frame = -1

Query: 348  GLELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGK 235
            G ++++ + +S   + + W++WN+ ++ + H +T + +
Sbjct: 909  GSDMDEPYAVSLYQDYVYWSDWNTGDIERVHKTTGQNR 946


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,526,478
Number of Sequences: 53049
Number of extensions: 636965
Number of successful extensions: 1450
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)