Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0026
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.          35   0.31 
AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens ...    33   0.95 
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.          32   1.7  
AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AK098235-1|BAC05265.1|  195|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AK096400-1|BAC04777.1|  644|Homo sapiens protein ( Homo sapiens ...    32   2.2  
AF103198-1|AAD30758.1|  129|Homo sapiens immunoglobulin heavy ch...    32   2.2  
X03145-4|CAA26918.1|  140|Homo sapiens protein ( Human KpnI repe...    30   6.7  
DQ100819-1|AAZ08826.1|  122|Homo sapiens immunoglobulin heavy ch...    30   8.9  
AF376945-1|AAK56965.1|  108|Homo sapiens immunoglobulin heavy ch...    30   8.9  

>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
          Length = 1275

 Score = 34.7 bits (76), Expect = 0.31
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+      IIR      +   R+ G +     L  G  QG  LSPLLF++ +  + 
Sbjct: 617 LNKLGIDGTYFKIIRAIYDKPTANIRLNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLA 676

Query: 192 RS--------------PETHLALFADDTAIY 242
           R+               E  L+LFADD  +Y
Sbjct: 677 RAIRQEKEIKGIQLGKEEVKLSLFADDMIVY 707


>AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37568 fis, clone BRCOC2002323. ).
          Length = 272

 Score = 33.1 bits (72), Expect = 0.95
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+    + IIR           + G +     LT G  QG  LSPLLF++ +  +P
Sbjct: 23  LNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTGTRQGCPLSPLLFNIVLEVLP 82

Query: 192 RS--------------PETHLALFADDTAIY 242
            +               E  L LFADD  +Y
Sbjct: 83  TAIRQEKEIKRIHIGREEVQLPLFADDMIVY 113


>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
          Length = 1275

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+    + IIR      +    + G +     L  G  QG  LSPLLF++ +  + 
Sbjct: 617 LNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLA 676

Query: 192 RS--------------PETHLALFADDTAIY 242
           R+               E  L+LFADD  +Y
Sbjct: 677 RAIRQEKEIKGIQLGKEEVKLSLFADDMIVY 707


>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+    + IIR     R+    + G +     L  G  QG  LSPLLF++ +  + 
Sbjct: 48  LNKLGIEGPCLKIIRAICDKRTANIILNGQQLEAFPLKTGTRQGCPLSPLLFNIVLEVLA 107

Query: 192 RS 197
           R+
Sbjct: 108 RA 109


>AK098235-1|BAC05265.1|  195|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40916 fis, clone UTERU2005533. ).
          Length = 195

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+    + IIR     R+    + G +     L  G  QG  LSPLLF++ +  + 
Sbjct: 5   LNKLGIEGPCLKIIRAICDKRTANIILNGQQLEAFPLKTGTRQGCPLSPLLFNIVLEVLA 64

Query: 192 RS 197
           R+
Sbjct: 65  RA 66


>AK096400-1|BAC04777.1|  644|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39081 fis, clone NT2RP7018340. ).
          Length = 644

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+      IIR      +    + G +     L  G  QG  LSPLLF++ +  + 
Sbjct: 15  LIKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLA 74

Query: 192 RS--------------PETHLALFADDTAIY 242
           R+               E  L+LFADD  +Y
Sbjct: 75  RAIRQEKEIKGIQLGKEEVKLSLFADDMIVY 105


>AF103198-1|AAD30758.1|  129|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 129

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 213 ALFADDTAIYYSCRKMSLLHRRLQIAVATLGQW 311
           +L A+DTA+YY  ++MS++    +I V   G W
Sbjct: 77  SLRAEDTALYYCAKEMSVVEGYEEIVVLPTGNW 109


>X03145-4|CAA26918.1|  140|Homo sapiens protein ( Human KpnI
           repetitive sequence (T-betaG41) 3kb downstream of
           beta-globin gene.  ).
          Length = 140

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 12  LYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP 191
           L  +G+    + IIR      +    + G +     L  G  QG  LSPLLF++ +  + 
Sbjct: 55  LNKLGIDGTYLKIIRAIYDKPTANIILSGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLA 114

Query: 192 RS 197
           R+
Sbjct: 115 RA 116


>DQ100819-1|AAZ08826.1|  122|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query: 213 ALFADDTAIYYSCRKMSLLHRRLQIAV--ATLGQWFRKW 323
           +L A+DTA+YY C K    H  L I V  A +G WF  W
Sbjct: 85  SLRAEDTAVYY-CAKD---HPGLDIVVVPAAIGNWFDPW 119


>AF376945-1|AAK56965.1|  108|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 108

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 216 LFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKW 323
           L +DDTA+YY  R++SL +       +    WF  W
Sbjct: 62  LRSDDTAVYYCAREVSLRYCSSTSCYSPALNWFDPW 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,758,665
Number of Sequences: 237096
Number of extensions: 2588668
Number of successful extensions: 17891
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17891
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)