Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0024
         (455 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5KCB8 Cluster: Expressed protein; n=2; Filobasidiella ...    33   3.8  
UniRef50_Q969R2 Cluster: Oxysterol-binding protein 2; n=76; Eume...    32   5.1  

>UniRef50_Q5KCB8 Cluster: Expressed protein; n=2; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 864

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = -3

Query: 351 PPRNMRSKFQLYSITAVRPLKLECIAASRQI*W*WCTRAG*QD 223
           PP+  R + QLYS    R LKL+C    RQ+    CTR G Q+
Sbjct: 29  PPKKKRRQRQLYSCAECRRLKLKC---DRQVPCSNCTRRGCQE 68


>UniRef50_Q969R2 Cluster: Oxysterol-binding protein 2; n=76;
           Eumetazoa|Rep: Oxysterol-binding protein 2 - Homo
           sapiens (Human)
          Length = 916

 Score = 32.3 bits (70), Expect = 5.1
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = +2

Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
           C++VS  P    HY +      +W+E  I S F+G+   I+    + L F+    HYV
Sbjct: 621 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 678


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,134,353
Number of Sequences: 1657284
Number of extensions: 9725845
Number of successful extensions: 18038
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18038
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)