Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0024
         (455 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    24   2.2  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   5.1  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   6.7  
AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    22   8.9  

>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 124 PRYSIKSVQNPTDR*GCSSEYIPDLDLNYM**GVLSAC 237
           P YS+  + +  DR GCS  +IP   +N +   +  +C
Sbjct: 129 PAYSVAPISSSPDRAGCS--FIPQGFVNCLYTALFKSC 164


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 106 PYPLGYDDLVYISMISST 53
           PYP+GY D V    + ST
Sbjct: 398 PYPMGYGDEVPSDPVGST 415


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 86  IISQRIRRPMYLYRDIPLSRFKTP 157
           I   R R+P ++ RD P+    TP
Sbjct: 202 ITCHRCRKPGHMKRDCPMESNNTP 225


>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -3

Query: 183 FTRTTLPVCGVLNRLNGISRYKYIGRLILWDMMTSFTY 70
           F     P CG+L  +    R       +LW  +T F +
Sbjct: 5   FLEIIKPFCGILPEIAKPERKIQFREKVLWTAITLFIF 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,163
Number of Sequences: 2352
Number of extensions: 10332
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)