BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0024
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC118914-1|AAI18915.1| 915|Homo sapiens oxysterol binding prote... 32 0.81
AL079299-1|CAI14632.1| 917|Homo sapiens oxysterol binding prote... 32 0.81
AL022336-1|CAI22805.1| 917|Homo sapiens oxysterol binding prote... 32 0.81
AK131374-1|BAD18525.1| 743|Homo sapiens protein ( Homo sapiens ... 32 0.81
AK093196-1|BAC04091.1| 549|Homo sapiens protein ( Homo sapiens ... 32 0.81
AF323731-1|AAG53406.1| 916|Homo sapiens OSBP-related protein 4 ... 32 0.81
AF288742-1|AAK56865.1| 878|Homo sapiens oxysterol binding prote... 32 0.81
AF288741-1|AAK56864.1| 878|Homo sapiens oxysterol binding prote... 32 0.81
AC004542-1|AAC12953.1| 569|Homo sapiens WUGSC:H_DJ430N08.1 prot... 32 0.81
AB051451-1|BAB33334.2| 920|Homo sapiens KIAA1664 protein protein. 32 0.81
>BC118914-1|AAI18915.1| 915|Homo sapiens oxysterol binding protein
2 protein.
Length = 915
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 620 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 677
>AL079299-1|CAI14632.1| 917|Homo sapiens oxysterol binding protein
2 protein.
Length = 917
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 621 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 678
>AL022336-1|CAI22805.1| 917|Homo sapiens oxysterol binding protein
2 protein.
Length = 917
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 621 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 678
>AK131374-1|BAD18525.1| 743|Homo sapiens protein ( Homo sapiens
cDNA FLJ16431 fis, clone BRACE3009127, highly similar
to Homo sapiens oxysterol binding protein 2 (OSBP2). ).
Length = 743
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 448 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 505
>AK093196-1|BAC04091.1| 549|Homo sapiens protein ( Homo sapiens
cDNA FLJ35877 fis, clone TESTI2008425, moderately
similar to OXYSTEROL-BINDING PROTEIN. ).
Length = 549
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 254 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 311
>AF323731-1|AAG53406.1| 916|Homo sapiens OSBP-related protein 4
protein.
Length = 916
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 621 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 678
>AF288742-1|AAK56865.1| 878|Homo sapiens oxysterol binding protein
2 protein.
Length = 878
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 583 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 640
>AF288741-1|AAK56864.1| 878|Homo sapiens oxysterol binding protein
2 protein.
Length = 878
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 583 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 640
>AC004542-1|AAC12953.1| 569|Homo sapiens WUGSC:H_DJ430N08.1
protein.
Length = 569
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 340 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 397
>AB051451-1|BAB33334.2| 920|Homo sapiens KIAA1664 protein protein.
Length = 920
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 212 CDRVSCQPARVHHYHY------IWREAAIHSSFKGRTAVILYS*NLDLMFRGG*RHYV 367
C++VS P HY + +W+E I S F+G+ I+ + L F+ HYV
Sbjct: 625 CEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAIHLEFQASGNHYV 682
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,725,707
Number of Sequences: 237096
Number of extensions: 1581996
Number of successful extensions: 2414
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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