Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0024
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   0.68 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   0.68 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   4.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   4.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 34  YYFYCYTLTRSWICKRGHHIPKD 102
           YY+Y   +   W+    +H+PK+
Sbjct: 233 YYYYMREMLPYWMSSSQYHMPKE 255


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 34  YYFYCYTLTRSWICKRGHHIPKD 102
           YY+Y   +   W+    +H+PK+
Sbjct: 233 YYYYMREMLPYWMSSSQYHMPKE 255


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 88   HIPKDKAADVL 120
            HIPKDK+  VL
Sbjct: 1487 HIPKDKSVSVL 1497


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 409 PVIEGYHSPVKKKKK 453
           P+IE YH   KK  K
Sbjct: 67  PIIEDYHGGFKKTDK 81


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 272  AAIHSSFKGRTAVIL 316
            AA+H + +GRTA ++
Sbjct: 1147 AALHEALRGRTAQLI 1161


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 409 PVIEGYHSPVKKKKK 453
           P+IE YH   KK  K
Sbjct: 83  PIIEDYHGGFKKTDK 97


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 91  YDDLVYISMISSTYS 47
           Y D+V  + ISSTYS
Sbjct: 276 YADIVGFTAISSTYS 290


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 224 SCQPARVHHYHYIWREAAI 280
           S Q  + +  +Y+WR+A I
Sbjct: 135 SVQRIKPYDEYYVWRDARI 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,707
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)