Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0022
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.                  31   2.9  
U77782-1|AAB71624.1| 1236|Homo sapiens N-methyl-D-aspartate rece...    31   3.9  
L76224-1|AAA88096.1| 1233|Homo sapiens NMDA receptor protein.          31   3.9  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   3.9  
BC112984-1|AAI12985.1|  206|Homo sapiens FLJ37201 protein protein.     30   6.8  
BC112983-1|AAI12984.1|  199|Homo sapiens hypothetical protein FL...    30   6.8  
BC104182-1|AAI04183.2|  199|Homo sapiens hypothetical protein FL...    30   6.8  
BC104181-1|AAI04182.2|  199|Homo sapiens hypothetical protein FL...    30   6.8  
BC043217-1|AAH43217.1|  199|Homo sapiens FLJ37201 protein protein.     30   6.8  
AK094520-1|BAC04373.1|  199|Homo sapiens protein ( Homo sapiens ...    30   6.8  

>M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = +1

Query: 4   TANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           T  TTT  V P  T T    +T   + T   +TP P    T   TP  +       T  P
Sbjct: 189 TPITTTTTVTPTPTPTSTQSTTPTPITTTNTVTPTPTPTGTQTPTPTPITTTTTMVTPTP 248

Query: 184 CINS 195
            I S
Sbjct: 249 TITS 252



 Score = 29.9 bits (64), Expect = 8.9
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMV 180
           +T  TTT  V P  T T   + T   + T   +TP P   +T + TP  +      NT+ 
Sbjct: 165 TTPITTTTTVTPTPTPTGTRYPTPTPITTTTTVTPTPTPTSTQSTTPTPI---TTTNTVT 221

Query: 181 P 183
           P
Sbjct: 222 P 222


>U77782-1|AAB71624.1| 1236|Homo sapiens N-methyl-D-aspartate receptor
            2C subunit precursor protein.
          Length = 1236

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -3

Query: 106  SV*AFCECPRSERLSGHSSCRSLAEARS*LLCWP 5
            S+ A C  P   R  GHS+CR LA+A+S  +C P
Sbjct: 1098 SLPAGCTGPACARPDGHSACRRLAQAQS--MCLP 1129


>L76224-1|AAA88096.1| 1233|Homo sapiens NMDA receptor protein.
          Length = 1233

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -3

Query: 106  SV*AFCECPRSERLSGHSSCRSLAEARS*LLCWP 5
            S+ A C  P   R  GHS+CR LA+A+S  +C P
Sbjct: 1095 SLPAGCTGPACARPDGHSACRRLAQAQS--MCLP 1126


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related
           tumor marker CA125 protein.
          Length = 22152

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 46  GTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVPCINSKPYQYTELLM 225
           GT+ G STS    T    T + +   T + T  K  +  +  +M P   S P + +E+  
Sbjct: 394 GTLGGTSTSALTTTSPSTTLVSEETNTHHSTSGKETEGTLNTSMTPLETSAPGEESEMTA 453

Query: 226 TL 231
           TL
Sbjct: 454 TL 455


>BC112984-1|AAI12985.1|  206|Homo sapiens FLJ37201 protein protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 34  PQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           P+ T TM N  +T+   DT+++LT +   N  G H   K++ A++ N++ P
Sbjct: 130 PRKTLTMANKRATTDVKDTKQKLTVLECANAAGTH---KIKLAVIGNSLYP 177


>BC112983-1|AAI12984.1|  199|Homo sapiens hypothetical protein
           FLJ37201 protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 34  PQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           P+ T TM N  +T+   DT+++LT +   N  G H   K++ A++ N++ P
Sbjct: 123 PRKTLTMANKRATTDVKDTKQKLTVLECANAAGTH---KIKLAVIGNSLYP 170


>BC104182-1|AAI04183.2|  199|Homo sapiens hypothetical protein
           FLJ37201 protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 34  PQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           P+ T TM N  +T+   DT+++LT +   N  G H   K++ A++ N++ P
Sbjct: 123 PRKTLTMANKRATTDVKDTKQKLTVLECANAAGTH---KIKLAVIGNSLYP 170


>BC104181-1|AAI04182.2|  199|Homo sapiens hypothetical protein
           FLJ37201 protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 34  PQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           P+ T TM N  +T+   DT+++LT +   N  G H   K++ A++ N++ P
Sbjct: 123 PRKTLTMANKRATTDVKDTKQKLTVLECANAAGTH---KIKLAVIGNSLYP 170


>BC043217-1|AAH43217.1|  199|Homo sapiens FLJ37201 protein protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 34  PQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           P+ T TM N  +T+   DT+++LT +   N  G H   K++ A++ N++ P
Sbjct: 123 PRKTLTMANKRATTDVKDTKQKLTVLECANAAGTH---KIKLAVIGNSLYP 170


>AK094520-1|BAC04373.1|  199|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37201 fis, clone BRALZ2006560. ).
          Length = 199

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 34  PQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           P+ T TM N  +T+   DT+++LT +   N  G H   K++ A++ N++ P
Sbjct: 123 PRKTLTMANKRATTDVKDTKQKLTVLECANAAGTH---KIKLAVIGNSLYP 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,579,003
Number of Sequences: 237096
Number of extensions: 1426193
Number of successful extensions: 4049
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4045
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)