Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0022
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021376-1|AAX33524.1|  758|Drosophila melanogaster LD46788p pro...   101   7e-22
AY069694-1|AAL39839.1|  843|Drosophila melanogaster LD46629p pro...   101   7e-22
AE014298-972|AAF46216.3|  758|Drosophila melanogaster CG33691-PA...   101   7e-22
AE014298-971|AAZ52507.1|  702|Drosophila melanogaster CG33691-PC...   101   7e-22
AE014298-970|AAO41636.1|  843|Drosophila melanogaster CG33691-PB...   101   7e-22
BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p pro...    30   2.6  
AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-P...    30   2.6  
AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-P...    30   2.6  
AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-P...    30   2.6  
AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-P...    30   2.6  
AE014298-1696|AAF48099.1|  135|Drosophila melanogaster CG15741-P...    30   3.4  
AE014298-1394|AAF46540.2|  364|Drosophila melanogaster CG32694-P...    29   4.5  
AY070931-1|AAL48553.1|  611|Drosophila melanogaster RE03173p pro...    29   7.9  
AL021726-3|CAA16810.1|  611|Drosophila melanogaster EG:171E4.2 p...    29   7.9  
AJ626646-1|CAF25166.1|  611|Drosophila melanogaster singed wings...    29   7.9  
AE014298-242|AAF45654.3|  611|Drosophila melanogaster CG3095-PA ...    29   7.9  
AE014296-1266|AAS65067.1|  240|Drosophila melanogaster CG33279-P...    29   7.9  

>BT021376-1|AAX33524.1|  758|Drosophila melanogaster LD46788p protein.
          Length = 758

 Score =  101 bits (243), Expect = 7e-22
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1    STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTG-NHTPYKVQKALVENTM 177
            +++N+ +M++        +  + +++ D+ +RL  IP+I T   N TPYKV K  V+  +
Sbjct: 600  ASSNSASMHLQRHAA-LAHAAAAANAADSAQRLCVIPEIPTNNMNLTPYKVLKVCVDKHL 658

Query: 178  VPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAMLDALGLILYRPNSTQLQVLRNSG 357
            VPCIN K Y  +E LMTL +   +FFP V L  C+ +++ALG+ LY+ N  Q+Q+L    
Sbjct: 659  VPCINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEALGVELYKANRRQVQILMEYD 718

Query: 358  KCKSAAAGENGMALVQVRDVMHHMLQFKYMLR 453
            +       EN M LVQVRD++ +M Q  +M R
Sbjct: 719  R----NYNEN-MPLVQVRDIIKYMTQLTFMTR 745


>AY069694-1|AAL39839.1|  843|Drosophila melanogaster LD46629p protein.
          Length = 843

 Score =  101 bits (243), Expect = 7e-22
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1    STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTG-NHTPYKVQKALVENTM 177
            +++N+ +M++        +  + +++ D+ +RL  IP+I T   N TPYKV K  V+  +
Sbjct: 685  ASSNSASMHLQRHAA-LAHAAAAANAADSAQRLCVIPEIPTNNMNLTPYKVLKVCVDKHL 743

Query: 178  VPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAMLDALGLILYRPNSTQLQVLRNSG 357
            VPCIN K Y  +E LMTL +   +FFP V L  C+ +++ALG+ LY+ N  Q+Q+L    
Sbjct: 744  VPCINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEALGVELYKANRRQVQILMEYD 803

Query: 358  KCKSAAAGENGMALVQVRDVMHHMLQFKYMLR 453
            +       EN M LVQVRD++ +M Q  +M R
Sbjct: 804  R----NYNEN-MPLVQVRDIIKYMTQLTFMTR 830


>AE014298-972|AAF46216.3|  758|Drosophila melanogaster CG33691-PA,
            isoform A protein.
          Length = 758

 Score =  101 bits (243), Expect = 7e-22
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1    STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTG-NHTPYKVQKALVENTM 177
            +++N+ +M++        +  + +++ D+ +RL  IP+I T   N TPYKV K  V+  +
Sbjct: 600  ASSNSASMHLQRHAA-LAHAAAAANAADSAQRLCVIPEIPTNNMNLTPYKVLKVCVDKHL 658

Query: 178  VPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAMLDALGLILYRPNSTQLQVLRNSG 357
            VPCIN K Y  +E LMTL +   +FFP V L  C+ +++ALG+ LY+ N  Q+Q+L    
Sbjct: 659  VPCINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEALGVELYKANRRQVQILMEYD 718

Query: 358  KCKSAAAGENGMALVQVRDVMHHMLQFKYMLR 453
            +       EN M LVQVRD++ +M Q  +M R
Sbjct: 719  R----NYNEN-MPLVQVRDIIKYMTQLTFMTR 745


>AE014298-971|AAZ52507.1|  702|Drosophila melanogaster CG33691-PC,
           isoform C protein.
          Length = 702

 Score =  101 bits (243), Expect = 7e-22
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTG-NHTPYKVQKALVENTM 177
           +++N+ +M++        +  + +++ D+ +RL  IP+I T   N TPYKV K  V+  +
Sbjct: 544 ASSNSASMHLQRHAA-LAHAAAAANAADSAQRLCVIPEIPTNNMNLTPYKVLKVCVDKHL 602

Query: 178 VPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAMLDALGLILYRPNSTQLQVLRNSG 357
           VPCIN K Y  +E LMTL +   +FFP V L  C+ +++ALG+ LY+ N  Q+Q+L    
Sbjct: 603 VPCINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEALGVELYKANRRQVQILMEYD 662

Query: 358 KCKSAAAGENGMALVQVRDVMHHMLQFKYMLR 453
           +       EN M LVQVRD++ +M Q  +M R
Sbjct: 663 R----NYNEN-MPLVQVRDIIKYMTQLTFMTR 689


>AE014298-970|AAO41636.1|  843|Drosophila melanogaster CG33691-PB,
            isoform B protein.
          Length = 843

 Score =  101 bits (243), Expect = 7e-22
 Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1    STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTG-NHTPYKVQKALVENTM 177
            +++N+ +M++        +  + +++ D+ +RL  IP+I T   N TPYKV K  V+  +
Sbjct: 685  ASSNSASMHLQRHAA-LAHAAAAANAADSAQRLCVIPEIPTNNMNLTPYKVLKVCVDKHL 743

Query: 178  VPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAMLDALGLILYRPNSTQLQVLRNSG 357
            VPCIN K Y  +E LMTL +   +FFP V L  C+ +++ALG+ LY+ N  Q+Q+L    
Sbjct: 744  VPCINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEALGVELYKANRRQVQILMEYD 803

Query: 358  KCKSAAAGENGMALVQVRDVMHHMLQFKYMLR 453
            +       EN M LVQVRD++ +M Q  +M R
Sbjct: 804  R----NYNEN-MPLVQVRDIIKYMTQLTFMTR 830


>BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p
           protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +1

Query: 10  NTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           NTTT   PP  T T+   STS +  T ++ T  P I T+   T      A   ++  P
Sbjct: 40  NTTT---PPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTP 94


>AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-PB,
           isoform B protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +1

Query: 10  NTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           NTTT   PP  T T+   STS +  T ++ T  P I T+   T      A   ++  P
Sbjct: 40  NTTT---PPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTP 94


>AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-PA,
           isoform A protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +1

Query: 10  NTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           NTTT   PP  T T+   STS +  T ++ T  P I T+   T      A   ++  P
Sbjct: 40  NTTT---PPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTP 94


>AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-PD,
           isoform D protein.
          Length = 183

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +1

Query: 10  NTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           NTTT   PP  T T+   STS +  T ++ T  P I T+   T      A   ++  P
Sbjct: 41  NTTT---PPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTP 95


>AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-PC,
           isoform C protein.
          Length = 183

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +1

Query: 10  NTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVP 183
           NTTT   PP  T T+   STS +  T ++ T  P I T+   T      A   ++  P
Sbjct: 41  NTTT---PPDTTTTVTPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTP 95


>AE014298-1696|AAF48099.1|  135|Drosophila melanogaster CG15741-PA
           protein.
          Length = 135

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLT 102
           STA TTT  V P  T T    S+S S D + R T
Sbjct: 64  STATTTTTTVAPTTTTTTEASSSSSSSDKKVRHT 97


>AE014298-1394|AAF46540.2|  364|Drosophila melanogaster CG32694-PB,
           isoform B protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPY 144
           +T++TT +  P + T T      ++S+D  + LT I DIN   N T Y
Sbjct: 282 TTSSTTDLTPPIEPTTTNILFPNNNSIDDPQLLTIIADINRLLNSTNY 329


>AY070931-1|AAL48553.1|  611|Drosophila melanogaster RE03173p
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIP 111
           S A T +M+ P  VT T +  STSHS  T    +P P
Sbjct: 90  SLAETQSMSDPGSVTDTTST-STSHSTSTTSTTSPAP 125


>AL021726-3|CAA16810.1|  611|Drosophila melanogaster EG:171E4.2
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIP 111
           S A T +M+ P  VT T +  STSHS  T    +P P
Sbjct: 90  SLAETQSMSDPGSVTDTTST-STSHSTSTTSTTSPAP 125


>AJ626646-1|CAF25166.1|  611|Drosophila melanogaster singed wings
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIP 111
           S A T +M+ P  VT T +  STSHS  T    +P P
Sbjct: 90  SLAETQSMSDPGSVTDTTST-STSHSTSTTSTTSPAP 125


>AE014298-242|AAF45654.3|  611|Drosophila melanogaster CG3095-PA
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTMNGHSTSHSVDTRKRLTPIP 111
           S A T +M+ P  VT T +  STSHS  T    +P P
Sbjct: 90  SLAETQSMSDPGSVTDTTST-STSHSTSTTSTTSPAP 125


>AE014296-1266|AAS65067.1|  240|Drosophila melanogaster CG33279-PA
           protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1   STANTTTMNVPPQVTGTM-NGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTM 177
           S +N TT +        + NGH+ +    T++++  +PD ++T N  P    K    N +
Sbjct: 22  SNSNATTASSNNVANAAVENGHTIADVAATKQQMPQMPDASSTLNKEPNNNNKISNNNII 81

Query: 178 VPCIN 192
              IN
Sbjct: 82  SGAIN 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,404,704
Number of Sequences: 53049
Number of extensions: 465180
Number of successful extensions: 1534
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)