Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0017
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p pro...    30   3.3  
AF132165-1|AAD34753.1|  737|Drosophila melanogaster unknown prot...    29   7.6  
AF017777-4|AAC28403.1|  737|Drosophila melanogaster penguin prot...    29   7.6  
AE014298-3120|AAF50828.1|  737|Drosophila melanogaster CG1685-PA...    29   7.6  

>AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p
           protein.
          Length = 158

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 653 LSSRMKIMKKVNPRAKKRKCRIMPKAKLHRPRRMPRNEQTA 531
           L  R ++     PR K+R  R+ P+ + HRP+R     +TA
Sbjct: 56  LLPRRQLPAMTAPRKKRRPRRLPPQQRRHRPKRPSLQAKTA 96


>AF132165-1|AAD34753.1|  737|Drosophila melanogaster unknown
           protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 672 EEEGDDSQFKDEDNEEGEPKGKKAK 598
           ++EGD+ + K+   ++ EPK KKAK
Sbjct: 595 DDEGDEKEQKEAAADDAEPKVKKAK 619


>AF017777-4|AAC28403.1|  737|Drosophila melanogaster penguin
           protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 672 EEEGDDSQFKDEDNEEGEPKGKKAK 598
           ++EGD+ + K+   ++ EPK KKAK
Sbjct: 595 DDEGDEKEQKEAAADDAEPKVKKAK 619


>AE014298-3120|AAF50828.1|  737|Drosophila melanogaster CG1685-PA
           protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 672 EEEGDDSQFKDEDNEEGEPKGKKAK 598
           ++EGD+ + K+   ++ EPK KKAK
Sbjct: 595 DDEGDEKEQKEAAADDAEPKVKKAK 619


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,170,671
Number of Sequences: 53049
Number of extensions: 501403
Number of successful extensions: 1642
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)