Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0012
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 88   YFHIEDEIVYENFYF 132
            Y+H EDE+V+ N  F
Sbjct: 1607 YYHPEDEVVFYNANF 1621


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 399 CSHNYRTLTVQFYRRAYSSKNPT*NYN 319
           CS     + + FY R ++  N   NYN
Sbjct: 257 CSPKKLIVGIPFYGRTFTLSNSNTNYN 283



 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +1

Query: 64  PKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFC 174
           P P  ++    ++  +  +    DF P+ LC  Y  C
Sbjct: 458 PAPAVSNPQNEVDGSVAPKECKQDFMPHELCDKYYRC 494


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 569 LIDRVIEEESLYVF*HPLNSGEINNKL 489
           LIDR  +E   Y   + L  G  NNKL
Sbjct: 259 LIDRKYDENVDYQVRYWLQKGAPNNKL 285


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 321 YNFKLDFYWSTLVYRTARSMFYNYVNILME 410
           Y F L   +  +V  T   +FY Y  IL E
Sbjct: 30  YQFFLAVQYPRIVVSTFNIVFYMYTLILEE 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,644
Number of Sequences: 336
Number of extensions: 2901
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)