Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0010
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein. 31 5.0
X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein. 31 5.0
S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein. 31 5.0
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 31 5.0
BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (... 31 5.0
AY438664-1|AAR05447.1| 1203|Homo sapiens patched homolog 2 (Dros... 31 5.0
AY359016-1|AAQ89375.1| 1203|Homo sapiens Patched 2 protein. 31 5.0
AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein. 31 5.0
AL592166-5|CAI13000.1| 1203|Homo sapiens patched homolog 2 (Dros... 31 5.0
AL136380-1|CAI23127.1| 1203|Homo sapiens patched homolog 2 (Dros... 31 5.0
AF119569-1|AAD17260.1| 1146|Homo sapiens patched 2 protein. 31 5.0
AF091501-1|AAC79847.1| 1203|Homo sapiens receptor protein patche... 31 5.0
AF087651-1|AAD25953.1| 1203|Homo sapiens patched 2 protein. 31 5.0
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 31 5.0
BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein pr... 30 8.7
>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
Length = 1139
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 197 LNINSKSLQTEPPSLSSRLVQYLDRQILL*LRT*LFDFKVVRKSSECFLPLTSDVHSL 370
LN S + E + + L Q+ D+ L + T L + ++++S C P+++ HSL
Sbjct: 369 LNAGSGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIKENSPCVTPVSTATHSL 426
>X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.
Length = 1082
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 197 LNINSKSLQTEPPSLSSRLVQYLDRQILL*LRT*LFDFKVVRKSSECFLPLTSDVHSL 370
LN S + E + + L Q+ D+ L + T L + ++++S C P+++ HSL
Sbjct: 312 LNAGSGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIKENSPCVTPVSTATHSL 369
>S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.
Length = 1139
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 197 LNINSKSLQTEPPSLSSRLVQYLDRQILL*LRT*LFDFKVVRKSSECFLPLTSDVHSL 370
LN S + E + + L Q+ D+ L + T L + ++++S C P+++ HSL
Sbjct: 369 LNAGSGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIKENSPCVTPVSTATHSL 426
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 422 SVSLCAVVCPPHHHTDGKQFICPYS 496
S LC + CPPH H + + CP S
Sbjct: 1128 SEELCPLSCPPHSHYEACSYGCPLS 1152
>BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2
(p130) protein.
Length = 1139
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 197 LNINSKSLQTEPPSLSSRLVQYLDRQILL*LRT*LFDFKVVRKSSECFLPLTSDVHSL 370
LN S + E + + L Q+ D+ L + T L + ++++S C P+++ HSL
Sbjct: 369 LNAGSGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIKENSPCVTPVSTATHSL 426
>AY438664-1|AAR05447.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AY359016-1|AAQ89375.1| 1203|Homo sapiens Patched 2 protein.
Length = 1203
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein.
Length = 1211
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AL592166-5|CAI13000.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AL136380-1|CAI23127.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AF119569-1|AAD17260.1| 1146|Homo sapiens patched 2 protein.
Length = 1146
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AF091501-1|AAC79847.1| 1203|Homo sapiens receptor protein patched 2
protein.
Length = 1203
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AF087651-1|AAD25953.1| 1203|Homo sapiens patched 2 protein.
Length = 1203
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 648 QKMFLLISREYYHEHFLGKCLLYDVGW 568
Q FLL+S +EHF G +D+GW
Sbjct: 317 QSTFLLMSPRQLYEHFRGDYQTHDIGW 343
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 422 SVSLCAVVCPPHHHTDGKQFICPYS 496
S LC + CPPH H + + CP S
Sbjct: 1128 SEELCPLSCPPHSHYEACSYGCPLS 1152
>BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein
protein.
Length = 849
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 197 LNINSKSLQTEPPSLSSRLVQYLDRQILL*LRT*LFDFKVVRKSSECFLPLTSDVHSL 370
LN S + E + + L Q+ D+ L + T L + ++++S C P+ + HSL
Sbjct: 79 LNAGSGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIKENSPCVTPVPTATHSL 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,556,936
Number of Sequences: 237096
Number of extensions: 1822586
Number of successful extensions: 2714
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2714
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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