Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0009
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 338 PVPYPVEKHVPYPVKVAVPQP 400
           PVP PVE+    P     P P
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAP 412


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 131 RGLLNLGYGYGIDGLDVGYIGHGQGLGGA 217
           +  LNL   +G DG D+ +   GQ  G A
Sbjct: 127 KSALNLVQKWGFDGFDLDWEYPGQRGGAA 155


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 270 DIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR 383
           +IP+  R SP     + ++P+T P  +      L PS+
Sbjct: 76  EIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSK 113


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 137 LLNLGYGYGIDGLDVGYIGHG 199
           LL LGY   +   D  Y+ HG
Sbjct: 472 LLELGYRIIVSTKDAWYLDHG 492


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 393 PNPTRSSNTCH 425
           PNP ++  TCH
Sbjct: 228 PNPCQNGGTCH 238


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 161 RIHTRGSGDHVCPI 120
           R HT  SGD  C +
Sbjct: 453 RYHTSASGDEACSL 466


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +3

Query: 600 CPNLTPWRNTCHTP 641
           C N  PW N C  P
Sbjct: 315 CFNAKPWSNYCVEP 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,568
Number of Sequences: 336
Number of extensions: 3072
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)