Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0004
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   1.0  
AJ419879-1|CAD12039.1|   34|Anopheles gambiae hypothetical prote...    23   6.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.0  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 22.6 bits (46), Expect(2) = 1.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = +2

Query: 608 FICIDRFLIITASFF---LSVSDNFSI 679
           FIC+  F IIT S +     +SD F +
Sbjct: 234 FICLYLFFIITLSIYGLMSQISDGFGV 260



 Score = 21.8 bits (44), Expect(2) = 1.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 494 RQTKIVKKCYFSVCTVHIFICM 559
           R +K+ +   FS C    FIC+
Sbjct: 216 RLSKLARDTGFSTCYTFTFICL 237


>AJ419879-1|CAD12039.1|   34|Anopheles gambiae hypothetical protein
           protein.
          Length = 34

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 596 TPILFICIDRFLIITA 643
           TP LFIC+   L+I++
Sbjct: 8   TPFLFICVSSSLVISS 23


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 516 FFTIFVCLSVCSG 478
           +FTIF  +SVC G
Sbjct: 8   YFTIFAVVSVCGG 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,873
Number of Sequences: 2352
Number of extensions: 11351
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)