Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2397
         (476 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E49D1A Cluster: PREDICTED: similar to fibropelli...    32   5.7  
UniRef50_Q9FKT6 Cluster: Dbj|BAA81760.1; n=4; core eudicotyledon...    32   5.7  
UniRef50_A0JMT9 Cluster: LOC779090 protein; n=6; Tetrapoda|Rep: ...    32   7.5  
UniRef50_Q8YXU9 Cluster: Chromate transport protein; n=4; Bacter...    32   7.5  
UniRef50_Q127J4 Cluster: Methionine synthase, vitamin-B12 indepe...    31   10.0 
UniRef50_A2YSR1 Cluster: Putative uncharacterized protein; n=1; ...    31   10.0 
UniRef50_A1DK66 Cluster: Fungal specific transcription factor, p...    31   10.0 

>UniRef50_UPI0000E49D1A Cluster: PREDICTED: similar to fibropellin
           Ia; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to fibropellin Ia - Strongylocentrotus
           purpuratus
          Length = 871

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 205 QFTPKPDINSAWCIDLLEASNVNSVTGTAGKMC 303
           Q T  P +N A C+DL+ A     +TGT G  C
Sbjct: 328 QCTSNPCVNGATCVDLIRAYQCVCLTGTRGLNC 360


>UniRef50_Q9FKT6 Cluster: Dbj|BAA81760.1; n=4; core
           eudicotyledons|Rep: Dbj|BAA81760.1 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 237

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 111 ILSRWKISNFISLSTSIVFVFRVSRSLFIKQTVY 212
           +  +W I + +SL+TS+V VF V   LF+   VY
Sbjct: 122 VCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVY 155


>UniRef50_A0JMT9 Cluster: LOC779090 protein; n=6; Tetrapoda|Rep:
            LOC779090 protein - Xenopus laevis (African clawed frog)
          Length = 1427

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 445  CRVIRSRQVHNVRHIKDQLLADFIHVVSDFGLANTATNTPRIPTPK 308
            CRVI  R+V   R++      DFIH V +  L     NT  +P P+
Sbjct: 1079 CRVIGGREVKTHRYLPITH-PDFIHSVPELSLLPELINTDNVPKPR 1123


>UniRef50_Q8YXU9 Cluster: Chromate transport protein; n=4;
           Bacteria|Rep: Chromate transport protein - Anabaena sp.
           (strain PCC 7120)
          Length = 402

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 205 QFTPKPDINSAWCIDLLEASNVNSVTGTAGKMCRFLVLVFWVCLW 339
           QFTP P   +A  I  L A N  ++ GT G      +LV+ V  W
Sbjct: 281 QFTPGPVFTTATFIGYLLAGNAGAIAGTIGIFLPAFILVWIVNPW 325


>UniRef50_Q127J4 Cluster: Methionine synthase, vitamin-B12
           independent; n=3; cellular organisms|Rep: Methionine
           synthase, vitamin-B12 independent - Polaromonas sp.
           (strain JS666 / ATCC BAA-500)
          Length = 377

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -2

Query: 427 RQVHNVRHIKDQLLADFIHVVSDFGLANTATNTPRIPTP 311
           R +  VRH+KD  LADF ++ S     NT   T  IP+P
Sbjct: 111 RVIDKVRHVKDIQLADFQYLKSQVSAGNTPKVT--IPSP 147


>UniRef50_A2YSR1 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 51

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 350 REHRHKHTQNTNTKNRHILPAVPVTLF 270
           R++RH  T +TNT+N  + PA  +TLF
Sbjct: 15  RKYRHVGTPDTNTENERLNPASQLTLF 41


>UniRef50_A1DK66 Cluster: Fungal specific transcription factor,
           putative; n=4; Trichocomaceae|Rep: Fungal specific
           transcription factor, putative - Neosartorya fischeri
           (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 745

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
 Frame = -2

Query: 265 YWLPEDRCTMHYLYLVLG*TVCLINKLR-----DTLNTNTIEVDNEIKFDIFQRDNIRHR 101
           Y LP D   + Y Y  L   + + N +      D L+  TIEV N + +  +  +NI H 
Sbjct: 338 YTLPIDTSGLAYTYYGLAINMAIQNGMHRRFAGDGLDARTIEVRNRLWWSAYSLENILHG 397

Query: 100 APRGICTLNND 68
            P  +     D
Sbjct: 398 RPFSVSAAETD 408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,806,012
Number of Sequences: 1657284
Number of extensions: 10567281
Number of successful extensions: 29288
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29267
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)